Protein: | gi|29029100, gi|... |
Organism: | Arabidopsis thaliana |
Length: | 374 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29029100, gi|....
Description | E-value | Query Range |
Subject Range |
|
306.0 | [0..1] | [374..1] |
Region A: Residues: [1-195] |
1 11 21 31 41 51 | | | | | | 1 MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN 60 61 YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLNK 120 121 QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP 180 181 LGMMEPTSCN YYQTT |
Detection Method: | |
Confidence: | 40.221849 |
Match: | 1h88C |
Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.334577365229545 | bayes_pls_golite062009 |
transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
Region A: Residues: [196-374] |
1 11 21 31 41 51 | | | | | | 1 PSCNLEQKPL ITLKNMVKIE EEQERTNPDH HHQDSVTNPF DFSFSQLLLD PNYYLGSGGG 60 61 GEGDFAIMSS STNSPLPNTS SDQHPSQQQE ILQWFGSSNF QTEAINDMFI NNNNNIVNLE 120 121 TIENTKVYGD ASVAGAAVRA ALGGGTTSTS ADQSTISWED ITSLVNSEDA SYFNAPNHV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.