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View Structure Prediction Details

Protein: gi|15221559, gi|...
Organism: Arabidopsis thaliana
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221559, gi|....

Description E-value Query
Range
Subject
Range
gi|115480671, gi... - gi|52077048|dbj|BAD46080.1| molybdenum cofactor sulfurase protein -like [Oryza sativa Japonica Group...
339.0 [0..16] [316..21]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTLSPLLS PSPASEVAAR VSSLFVYPIK SCRGISLSQA ALTPTGFRWD RNWLIVNSKG  60
   61 RGLTQRVEPK LSLIEVEMPK HAFGEDWEPE KSSNMVVRAP GMDALKVSLA KPDKIADGVS 120
  121 VWEWSGSALD EGEEASQWFT NFVGKPCRLV RFNSAYETRP VDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 2exnA
Description: Solution structure for the protein coded by gene locus BB0938 of Bordetella bronchiseptica. Northeast Structural Genomics target BoR11.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [164-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYAPGHIAMF SDMYPFLLIS QGSLDSLNKL LKEPVPINRF RPNIFVDGCE PFAEDLWTEI  60
   61 LINGFTFHGV KLCSRCKVPT ISQETGIGGQ EPIETLRTFR SDKVLQPKSK PHGKIYFGQN 120
  121 MVWKDGFGDG IGKTIEIGDS VVVLRKLSSP AEAAT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.93
Match: 1oruA
Description: Crystal Structure of APC1665, YUAD protein from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.125452850367999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle