| Protein: | MYB6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 236 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..1] | [228..1] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKA HTNKGAWTKE EDQRLVDYIR NHGEGCWRSL PKSAGLLRCG KSCRLRWINY 60
61 LRPDLKRGNF TDDEDQIIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSHG 120
121 IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKP
|
| Detection Method: |  |
| Confidence: | 29.154902 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [160-236] |
1 11 21 31 41 51
| | | | | |
1 KTENSSDNGA STSGTTTDED LRQNGECYYS DNSGHIKLNL DLTLGFGSWS GRIVGVGSSA 60
61 DSKPWCDPVM EARLSLL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.519 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.425 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.389 | b.60.1 | Lipocalins |
| View | Download | 0.288 | d.82.2 | Frataxin-like |
| View | Download | 0.249 | c.55.1 | Actin-like ATPase domain |
