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View Structure Prediction Details

Protein: DOF32_ARATH
Organism: Arabidopsis thaliana
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF32_ARATH.

Description E-value Query
Range
Subject
Range
gi|5689615 - gi|5689615|emb|CAB51901.1| dof zinc finger protein [Arabidopsis thaliana]
294.0 [0..1] [245..1]
gi|37051125 - gi|37051125|dbj|BAC81659.1| DNA binding with one finger 2 protein [Pisum sativum]
206.0 [0..1] [244..1]
gi|92880883, gi|... - gi|92880883|gb|ABE85907.1| Zinc finger, Dof-type [Medicago truncatula], gi|92873064|gb|ABE81562.1| Z...
196.0 [0..18] [244..18]
gi|112363376 - gi|112363376|gb|ABI16012.1| Dof11 [Glycine max]
194.0 [0..15] [240..2]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYSSMHQNV MGVSSCSTQD YQNQKKPLSA TRPAPPEQSL RCPRCDSTNT KFCYYNNYSL  60
   61 SQPRYFCKSC RRYWTKGGIL RNIPIGGAYR KHKRSSSATK SLRTTPEPTM THDGKSFPTA 120
  121 SFGYNNNNIS NEQMELGLAY ALLNKQPLGV SSHLGFGSSQ SPMAMDGVYG TTSH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #2
Region A:
Residues: [175-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QMENTGYAFG NGGGGMEQMA TSDPNRVLWG FPWQMNMGGG SGHGHGHVDQ IDSGREIWSS  60
   61 TVNYINTGAL L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.581 d.64.1 eIF1-like
View Download 0.333 d.64.1 eIF1-like
View Download 0.318 a.60.11 Hypothetical protein YjbJ
View Download 0.301 d.58.17 Metal-binding domain
View Download 0.284 a.4.8 Ribosomal protein S18
View Download 0.280 a.60.4 DNA repair protein Rad51, N-terminal domain
View Download 0.234 d.68.5 C-terminal domain of ProRS
View Download 0.228 a.144.2 Ribosomal protein L20


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle