YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TIC22_ARATH
Organism: Arabidopsis thaliana
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIC22_ARATH.

Description E-value Query
Range
Subject
Range
TIC22_PEA - Protein TIC 22, chloroplastic OS=Pisum sativum GN=TIC22 PE=1 SV=1
292.0 [0..1] [266..1]

Back

Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSVKPNPF LSFSSFIHHQ CTRFSSDLSA RIEDTKRFAE TLATRRFSLP TPPPFASVSQ  60
   61 SKSGTPTTTL SPSLVAKALA GTSVFTVSNT NNEFVLISDP TGGKSIGLLC FRQEDAEAFL 120
  121 AQARLRRREL KTNAKVVPIT LDQVYLLKVE GISFRFLPDP IQIKNALELK SSGNKNGFD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [180-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVPVFQSELL VVRKKNRRYC PVYFSKEDIE RELSKYTRAS RGDQQIMVGS LEDVLRKMEM  60
   61 SEKNSGWEDV IFIPPGRSYA QHMQDLIKE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle