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View Structure Prediction Details

Protein: SCRK7_ARATH
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCRK7_ARATH.

Description E-value Query
Range
Subject
Range
gi|7434220, gi|2... - pir||T07588 fructokinase (EC 2.7.1.4) 1 - tomato, gi|2102691|gb|AAB57733.1| fructokinase
293.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEDAISGNL KNLTIDTRDS ETLVVCFGEM LIDFVPTVGG VSLAEAPAFK KAPGGAPANV  60
   61 AVGVSRLGGS SAFIGKVGDD EFGRMLADIL RLNNVDNSGM RFDHNARTAL AFVTLRGDGE 120
  121 REFLFFRHPS ADMLLLESEL DKNLIQKAKI FHYGSISLIE EPCRSTQLVA MKIAKAAGSL 180
  181 LSYDPNLRLP LWPSEEAARK EIMSIWNLAD VIKISEDEIT FLTGGDDPYD DDVVLQKLFH 240
  241 PNLKLLVVSE GPNGCRYYTQ EFKGRVGGVK VKPVDTTGAG DAFVSGLLNS LASDLTLLKD 300
  301 EKKLREALLF ANACGAITVT ERGAIPAMPS MDAVQDLLSS TRS

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Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 1tyyA
Description: Crystal structure of aminoimidazole riboside kinase from Salmonella enterica
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ribokinase activity 4.25786236481087 bayes_pls_golite062009
catalytic activity 2.11518580948187 bayes_pls_golite062009
carbohydrate kinase activity 1.99025603598964 bayes_pls_golite062009
transferase activity 1.65599843675995 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.53929419091344 bayes_pls_golite062009
kinase activity 1.44909019943198 bayes_pls_golite062009
phosphofructokinase activity 0.0784945911925501 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle