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View Structure Prediction Details

Protein: ACCR1_ARATH
Organism: Arabidopsis thaliana
Length: 775 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|5821298 - gi|5821298|dbj|BAA83906.1| SRK13-b [Brassica oleracea]
507.0 [0..3] [765..13]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRCSLLFL SLILLYLPKP GSGFGSSGPI AASFGGSAFF CAIDASGRQD VICWGKNYSS  60
   61 PSSPSSSSSS SSIASSTSAS YNIPSMAVLS GGDGFLCGIL SNTSQAFCFS SLGSSSGMDL 120
  121 VPLAYRTTAY SQIAAGNSHV CAVRGAYYSD HDSGTIDCWE ITRATNNNSL IAKENPNFYD 180
  181 QIVSNLVFNN IVSGDGFSCG GIRDGGMLCF GPNSSNLGFN TTSDNFQVLA AGKNSVCAIL 240
  241 NLSREVKCWG EDES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.30103
Match: 1i2mB
Description: Regulator of chromosome condensation RCC1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [255-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVNSPMNDSR FVSLTAGPRH FCGIREDNHE VECWGNSNFS LIPKGSGFKA IASSDFIVCG  60
   61 IREEDLVLDC WMVNGSSTLA YDPPLELCSP GMCRAGPCNE KEFAFNASIL NEPDLTSLCV 120
  121 RKELMVCSPC GSDCSHGFFL SSSCTANSDR ICTPCSLCQN SSCSDICKLH NSNFPDKHWH 180
  181 QLQRLVLIIG SCASALLIII IGCCVVPRIV TSPNKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.8
Match: 1a12A
Description: Regulator of chromosome condensation RCC1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [471-775]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGAANQFKSC IGKPDLDTDQ PLENVSPAPS VTPFAQVFRL SELKDATNGF KEFNELGRGS  60
   61 YGFVYKAVLA DGRQVAVKRA NAATIIHTNT REFETELEIL CNIRHCNIVN LLGYSTEMGE 120
  121 RLLVYEYMPH GTLHDHLHSG FSPLSWSLRI KIAMQTAKGL EYLHNEAEPR IIHGDVKSSN 180
  181 VLLDSEWVAR VADFGLVTSS NEKNLDIKRD VYDFGVVLLE ILTGRKRYDR DCDPPEIVEW 240
  241 TVPVIREGKA AAIVDTYIAL PRNVEPLLKL ADVAELCVRE DPNQQPTMSE LANWLEHVAR 300
  301 DALIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle