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View Structure Prediction Details

Protein: gi|7487270, gi|4...
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487270, gi|4....

Description E-value Query
Range
Subject
Range
FRS5_ARATH - Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1
186.0 [0..4] [178..67]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGDLKLDEP YVGLKFESEE EAKDFYVEYS KRLGFVVRMM QRRRSGIDGR TLARRLGCNK  60
   61 QGFGPNNQRS SSSSSSSREG CKATILVKME KSGKWVVTRF IKEHNHSLQF IG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.956
Match: 1wj2A
Description: Solution Structure of the C-terminal WRKY Domain of AtWRKY4
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [113-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSYDSFADK ERKIKELTEE IECQDRLCDV YRDRLVSFID NVEHYTEELS LKVRDIVENV  60
   61 KKLECQIQTR A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle