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View Structure Prediction Details

Protein: ENDO1_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENDO1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3551956 - gi|3551956|gb|AAC34856.1| senescence-associated protein 6 [Hemerocallis hybrid cultivar]
378.0 [0..9] [300..3]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAFRSSTR LILVLGILIL CSVSSVRSWS KEGHILTCRI AQNLLEAGPA HVVENLLPDY  60
   61 VKGDLSALCV WPDQIRHWYK YRWTSHLHYI DTPDQACSYE YSRDCHDQHG LKDMCVDGAI 120
  121 QNFTSQLQHY GEGTSDRRYN MTEALLFLSH FMGDIHQPMH VGFTSDEGGN TIDLRWYKHK 180
  181 SNLHHVWDRE IILTALKENY DKNLDLLQED LEKNITNGLW HDDLSSWTEC NDLIACPHKY 240
  241 ASESIKLACK WGYKGVKSGE TLSEEYFNTR LPIVMKRIVQ GGVRLAMILN RVFSDDHAIA 300
  301 GVAAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.39794
Match: 1ak0A
Description: P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.237569247811196 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle