| Protein: | PERK4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 633 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PERK4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..36] | [609..77] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ 60
61 APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS PPSPPSRSNG DNGGSRSSPP 120
121 GDTGGSRSDN PPSSGGSSGG
|
| Detection Method: |  |
| Confidence: | 8.30103 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-213] |
1 11 21 31 41 51
| | | | | |
1 GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN 60
61 NNASQNYPNW HLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [214-633] |
1 11 21 31 41 51
| | | | | |
1 SQGQNQQSTG GWGGGGPSPP PPPRMPTSGE DSSMYSGPSR PVLPPPSPAL ALGFNKSTFT 60
61 YQELAAATGG FTDANLLGQG GFGYVHKGVL PSGKEVAVKS LKAGSGQGER EFQAEVDIIS 120
121 RVHHRYLVSL VGYCIADGQR MLVYEFVPNK TLEYHLHGKN LPVMEFSTRL RIALGAAKGL 180
181 AYLHEDCHPR IIHRDIKSAN ILLDFNFDAM VADFGLAKLT SDNNTHVSTR VMGTFGYLAP 240
241 EYASSGKLTE KSDVFSYGVM LLELITGKRP VDNSITMDDT LVDWARPLMA RALEDGNFNE 300
301 LADARLEGNY NPQEMARMVT CAAASIRHSG RKRPKMSQIV RALEGEVSLD ALNEGVKPGH 360
361 SNVYGSLGAS SDYSQTSYNA DMKKFRQIAL SSQEFPVSDC EGTSSNDSRD MGTKSPTPPK 420
421
|
| Detection Method: | |
| Confidence: | 73.045757 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
