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View Structure Prediction Details

Protein: IRE1A_ARATH
Organism: Arabidopsis thaliana
Length: 841 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IRE1A_ARATH.

Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRCPFLRH LFFLLLLLSP WIMSPCGGAA DDVTYPIVPS SPGRRSILQI RREPPTEPNT  60
   61 KLVVDRDGKV FLKQQPKETP YWSFSTGSPM HSLYQAPANN NTENATEITR PHIIVEYLNN 120
  121 SKAATTVDGY HNWTVQEFFR QKPLVTDDGV TLGSETTSAY LVDGRSGRLI HVYKSTGDTK 180
  181 ITNALVKPAS TEDFVNEPLL IRRTDSKLEH FSKTTGKLVW NLTVSHFRAA LLCDPVFNSG 240
  241 YDLGPKLQTG IYMPLLCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2hz6A
Description: No description for 2hz6A was found.

Predicted Domain #2
Region A:
Residues: [259-707]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQIDVRGPEI VIRVLHDQPM NVKMLPSPSL NHFESENSIM PFGKARESRK LQEQHKQKYT  60
   61 YLFGQWSPVK LLAPLVLLGV VVSVFIKKFS SRGSDVSLKA GPSKKKKNRK SAKDTNRQSV 120
  121 PRGQDQFELI EGGQMLLGFN NFQSGATDGR KIGKLFLSSK EIAKGSNGTV VFEGIYEGRP 180
  181 VAVKRLVRSH HEVAFKEIQN LIASDQHTNI IRWYGVEYDQ DFVYLSLERC TCSLDDLIKS 240
  241 YLEFSMTKVL ENNDSTEGVA AYKIQLDSLE GVIKGNNFWK VGGHPSPLML KLMRDIVCGI 300
  301 VHLHELGIVH RDLKPQNVLI SKDMTLSAKL SDMGISKRMS RDMSSLGHLA TGSGSSGWQA 360
  361 PEQLLQGRQT RAVDMFSLGC VIFYTITGCK HPFGDDLERD VNIVKNKVDL FLVEHVPEAS 420
  421 DLISRLLNPD PDLRPSATEV LLHPMFWNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 1opkA
Description: Abl tyrosine kinase, SH3 domain; Abl tyrosine kinase; Abelsone tyrosine kinase (abl)
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [708-841]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMRLSFLRDA SDRVELENRE ADSEILKAME STAPVAIGGK WDEKLEPVFI TNIGRYRRYK  60
   61 YDSIRDLLRV IRNKLNHHRE LPPEIQELVG TVPEGFDEYF AVRFPKLLIE VYRVISLHCR 120
  121 EEEVFRKYFK CDII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.221849
Match: 2rioA
Description: No description for 2rioA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle