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View Structure Prediction Details

Protein: gi|15234679, gi|...
Organism: Arabidopsis thaliana
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234679, gi|....

Description E-value Query
Range
Subject
Range
gi|7267221, gi|2... - gi|7267221|emb|CAB80828.1| putative protein [Arabidopsis thaliana], gi|4773907|gb|AAD29777.1|AF07402...
213.0 [0..1] [172..21]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGEEFQEE EVWSVLRESE TQGPEMKMSK SNNLFSASSS SSARYIPKGN EVSGGAKQSS  60
   61 APMNIPDWSK VYGYSKKNTS SHLHSWAIDD DDEGSMVPPH ELVAKRLART QISSFSMCEG 120
  121 IGRTLKGRDL SKTRNAVLTR TGFWIFLDKY DDDEDDLSIP CMGPYHFSHV MFVVLNGLLT 180
  181 L

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 82.69897
Match: PF04520.4
Description: No description for PF04520.4 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle