| Protein: | DUS3L_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 700 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUS3L_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
425.0 | [0..34] | [694..1] |
|
|
407.0 | [0..38] | [700..32] |
|
|
406.0 | [0..38] | [700..32] |
|
|
405.0 | [0..20] | [694..2] |
|
|
396.0 | [0..20] | [694..2] |
|
|
395.0 | [0..26] | [694..7] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MSDVIAEHAV DTSVEGDAKA ALPVQSTKQF SVYEATSEEL IERSMAPIKK EFLCPPPPSR 60
61 SVKQNDAADV RAPQSGLVQE KKSKRQLKRE RREV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-184] |
1 11 21 31 41 51
| | | | | |
1 LIRITSVLQS TINLCPQVAR TEDVDSCQYK DKCRFNHDIE AFKAQKADDI EGQCPFVASG 60
61 MKCAYGLSCR FLGSHRDITG NSDDKEKSEM
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [185-287] |
1 11 21 31 41 51
| | | | | |
1 NFFNKETQRL LWKNKMTFTN ADAKLKSLGL LGHAKKSNAA EEITAEKTQN GMNGTQATEV 60
61 AVDSAVSSEH TSEMIQDVDI PGPLETEEVR PMKKAKSEDQ KNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [288-345] |
1 11 21 31 41 51
| | | | | |
1 KTGDVGGVYD GVKLEEETKK NGYPTSKANV EDEDSIKIVE TDSSLKLHPR EKKKLIDF
|
| Detection Method: | |
| Confidence: | 18.154902 |
| Match: | 1djqA |
| Description: | Trimethylamine dehydrogenase, N-terminal domain; Trimethylamine dehydrogenase, C-terminal domain; Trimethylamine dehydrogenase, middle domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [346-700] |
1 11 21 31 41 51
| | | | | |
1 RDKLYLAPLT TVGNLPFRRL CKVLGADVTC GEMAMCTNLL QGQASEWALL RRHSSEDLFG 60
61 VQICGSYPDT VSRVVELIDR ECTVDFIDIN MGCPIDMVVN KSAGSALLNK PLRMKNIVEV 120
121 SSSIVETPIT IKVRTAFFEG KNRIDSLIAD IGNWGATAVT IHGRSRQQRY SKSADWDYIY 180
181 QCTKNATTNL QVIGNGDVYS YLDWNKHKSD CPELSSCMIA RGALIKPWIF TEIKEQRHWD 240
241 ITSGERLNIM KDFVRFGLQH WGSDTKGVET TRHFLLEWLS YTFRYIPVGL LDVIPQQINW 300
301 RPPSYFGRDD LETLMMSESA GDWVRISEML LGKVPEGFTF APKHKSNAYD RAENG
|
| Detection Method: | |
| Confidence: | 50.522879 |
| Match: | 1vhnA |
| Description: | Crystal structure of a putative flavin oxidoreductase with flavin |
Matching Structure (courtesy of the PDB): |
|
