| Protein: | CB60B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CB60B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
796.0 | [0..7] | [644..9] |
|
|
780.0 | [0..10] | [641..1] |
|
|
686.0 | [0..105] | [642..16] |
|
Region A: Residues: [1-244] |
1 11 21 31 41 51
| | | | | |
1 MMDSGNNNMN RAKRNLDGND DDQPERKRPA FASVIVEALK VDSLQKLCSS LEPILRRVVS 60
61 EELERALAKL GPARLTGSSG SSPKRIEGPD GRKLQLHFKS RLSLPLFTGG KVEGEQGAVI 120
121 HVVLIDANTG RAVVYGPEAS AKLHIVVLEG DFNTEDDEDW TQEEFESHVV KERSGKRPLL 180
181 TGEVYVTLKE GVGTLGELVF TDNSSWIRSR KFRLGLRVVS GCCDGMRIRE AKTEAFVVKD 240
241 HRGE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [245-394] |
1 11 21 31 41 51
| | | | | |
1 LYKKHYPPAL NDDVWRLDKI GKDGAFHKKL TAEGINTVED FLRVMVKDSP KLRTILGSGM 60
61 SNKMWDALVE HAKTCVQSSK LYIYYAEDSR NVGVVFNNIY ELSGLISGDQ YFSADSLTDS 120
121 QKVYVEGLVK KAYENWNLVI EYDGKSLLDL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.560 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.559 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.522 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.446 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.413 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.413 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.394 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.380 | c.57.1 | Molybdenum cofactor biosynthesis proteins |
| View | Download | 0.368 | d.136.1 | Phospholipase D/nuclease |
| View | Download | 0.358 | d.79.3 | L30e-like |
| View | Download | 0.357 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.356 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.354 | c.23.1 | CheY-like |
| View | Download | 0.297 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.294 | c.23.1 | CheY-like |
|
Region A: Residues: [395-647] |
1 11 21 31 41 51
| | | | | |
1 KQPQRLSITH TNLENYSTAA IDHPMQMVAG HSSSMPPNQS PVLSDFAIGG YDQTLATRYH 60
61 SHPQLLNSNP RAQFEVASCS TSQDQFMGNL HQTQSTINNQ HMNGLALGPS QSSTSGYQNI 120
121 NPSSVHQADL NHLEDWSNPR ERGPDDFFSE EEIRLRSHEM LESEDMQQFL RLFSMGGGGN 180
181 GSATHLPEDG YTFPSFLHTP MQGYDEDRGR SGRAVVGWLK IKAAMRWGFF IRRKAAERRA 240
241 QIVELDDDDE DGE
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
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