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View Structure Prediction Details

Protein: gi|11255893, gi|...
Organism: Arabidopsis thaliana
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11255893, gi|....

Description E-value Query
Range
Subject
Range
gi|74273629 - gi|74273629|gb|ABA01482.1| gibberellin 20-oxidase 1 [Gossypium hirsutum]
273.0 [0..3] [305..32]

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Predicted Domain #1
Region A:
Residues: [1-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKTEEEVS IIKVSSLTCI DLDNSDLHQS AVLLKQACLD SGFFYVINHG ISEELKDEAF  60
   61 EHSKKFFALP LEEKMKVLRN EKYRGYAPFH DSLLDPENQV RGDYKEGFTI GFEGSKDGPH 120
  121 WDKPFHSPNI WPNPDVLPGW RETMEKYYQE ALRVCKSIAK IMALALDLDV DYFNTPEMLG 180
  181 NPIADMVLFH YEGKSDPSKG IYACGAHSDF GMMSLLATDG VMGLQICKDK DVKPQKWEYT 240
  241 PSIKGAYIVN LGDLLERWSN GYFKSTLHRV LGNGQDRYSI PFFLKPSHDC IIECLPTCQS 300
  301 ENNLPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.154902
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2.13037944896112 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.96457406152694 bayes_pls_golite062009
binding 1.78258647804494 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
nucleic acid binding 0.778311364997835 bayes_pls_golite062009
DNA binding 0.705906158188305 bayes_pls_golite062009
protein binding 0.200706152890822 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle