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View Structure Prediction Details

Protein: SPL_ARATH
Organism: Arabidopsis thaliana
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPL_ARATH.

Description E-value Query
Range
Subject
Range
gi|5566240, gi|5... - gi|5566240|gb|AAD45344.1|AF159255_1 sporocyteless [Arabidopsis thaliana], gi|5007009|gb|AAD37775.1|A...
629.0 [0..1] [314..1]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLFFMST DQNSVGNPND LLRNTRLVVN SSGEIRTETL KSRGRKPGSK TGQQKQKKPT  60
   61 LRGMGVAKLE RQRIEEEKKQ LAAATVGDTS SVASISNNAT RLPVPVDPGV VLQGFPSSLG 120
  121 SNRIYCGGVG SGQVMIDPVI SPWGFVETSS TTHELSSISN PQMFNASSNN RCDTCFKKKR 180
  181 LDGDQNNVVR SNGGGFSKYT MIPPPMNGYD QYLLQSDHHQ RSQGFLYDHR IARAASVSAS 240
  241 STTINPYFNE ATNHTGPMEE FGSYMEGNPR NGSGGVKEYE FFPGKYGERV SVVAKTSSLV 300
  301 GDCSPNTIDL SLKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle