| Protein: | AGL23_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 226 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL23_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..6] | [221..1] |
|
|
202.0 | [0..6] | [219..1] |
|
|
200.0 | [0..6] | [224..1] |
|
|
200.0 | [0..6] | [221..1] |
|
|
199.0 | [0..6] | [220..1] |
|
|
199.0 | [0..6] | [219..1] |
|
|
199.0 | [0..6] | [223..1] |
|
|
198.0 | [0..6] | [224..1] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MVKKTLGRRK VEIVKMTKES NLQVTFSKRK AGLFKKASEF CTLCDAKIAM IVFSPAGKVF 60
61 SFGHPNVDVL LDHFRGCVVG HNNTNLDESY TKLHVQMLNK SYTEVKAEVE KEQKNKQSRA 120
121 Q
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1n6jA |
| Description: | Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [122-226] |
1 11 21 31 41 51
| | | | | |
1 NERENENAEE WWSKSPLELN LSQSTCMIRV LKDLKKIVDE KAIQLIHQTN PNFYVGSSSN 60
61 AAAPATVSGG NISTNQGFFD QNGMTTNPTQ TLLFGFDIMN RTPGV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.327 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.309 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.309 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.263 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.253 | N/A | N/A | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.246 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.238 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.233 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.231 | N/A | N/A | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.211 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
