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View Structure Prediction Details

Protein: gi|25404581, gi|...
Organism: Arabidopsis thaliana
Length: 190 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25404581, gi|....

Description E-value Query
Range
Subject
Range
C11orf73 - chromosome 11 open reading frame 73
gi|123998603, gi... - gi|123998603|gb|ABM86903.1| chromosome 11 open reading frame 73 [synthetic construct], gi|123984623|...
gi|114639664, gi... - gi|114639664|ref|XP_001175309.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes], gi|114...
gi|109108177 - gi|109108177|ref|XP_001102946.1| PREDICTED: similar to CG13926-PA isoform 4 [Macaca mulatta]
221.0 [0..1] [187..1]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGVVFPNRS FPIDISTFTQ IDTFHWVLDM NHFVGEAYDQ ISEMCIFLLN NFNLPPDKAL  60
   61 AVYVQSPGSA FVFCGAVTLA RPSAVLSLQW PEPGSAAKMQ LTAGDSSSLS AKIGVSVEDV 120
  121 AALRSLDVVA ERRIEKLAMK VGENLFNFMQ SFCGVDGSKL VVPMDILDRW FKKFQEKAKR 180
  181 DPDFLKSFAL 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.221849
Match: PF05603.3
Description: No description for PF05603.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle