| Protein: | SAL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 545 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAL1.
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..1] | [544..197] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MLLKNCETDK QRDIRYACLF KELDVKGNGQ VTLDNLISAF EKNDHPLKGN DEAIKMLFTA 60
61 MDVNKDSVVD LSDFKKYASN AESQIWNGFQ RIDLDHDGKI GINEINRYLS DLDNQSICNN 120
121 ELNHELSNEK MNKFSRFFEW AFPKRKANIA LRGQAS
|
| Detection Method: |  |
| Confidence: | 29.0 |
| Match: | 1cdlA |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.74623080162785 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.61874575467092 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.57032504567157 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.55650624542181 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.37465721152046 | bayes_pls_golite062009 |
| cation channel activity | 1.49312394054212 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| molecular transducer activity | 1.38521870126745 | bayes_pls_golite062009 |
| signal transducer activity | 1.38521870126745 | bayes_pls_golite062009 |
| potassium channel activity | 1.3851218799514 | bayes_pls_golite062009 |
| ion binding | 1.36376383271837 | bayes_pls_golite062009 |
| metal ion binding | 1.34827363853601 | bayes_pls_golite062009 |
| cation binding | 1.34827363853601 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 1.30851580400009 | bayes_pls_golite062009 |
| structural molecule activity | 1.26857768455914 | bayes_pls_golite062009 |
| transcription regulator activity | 1.22886396511326 | bayes_pls_golite062009 |
| protein binding | 1.16246005294206 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| channel activity | 1.05847414989139 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.05847414989139 | bayes_pls_golite062009 |
| ion channel activity | 1.0369591011376 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.03529144716694 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.986621437232479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.910148857310729 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.896351900356978 | bayes_pls_golite062009 |
| gated channel activity | 0.855502499003241 | bayes_pls_golite062009 |
| nucleic acid binding | 0.849623084382492 | bayes_pls_golite062009 |
| DNA binding | 0.81633153359201 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.75057755360417 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 0.717054504236607 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
| 0.34446792626966 | bayes_pls_golite062009 | |
| channel regulator activity | 0.32809521759917 | bayes_pls_golite062009 |
| protein complex binding | 0.278602833762221 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.23313435855689 | bayes_pls_golite062009 |
| motor activity | 0.0886596083402598 | bayes_pls_golite062009 |
| transcription factor binding | 0.02456682442567 | bayes_pls_golite062009 |
|
Region A: Residues: [157-219] |
1 11 21 31 41 51
| | | | | |
1 HKKNTDNDRS KKTTDSDLYV TYDQWRDFLL LVPRKQGSRL HTAYSYFYLF NEDVDLSSEG 60
61 DVT
|
| Detection Method: | |
| Confidence: | 0.992 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [220-545] |
1 11 21 31 41 51
| | | | | |
1 LINDFIRGFG FFIAGGISGV ISRTCTAPFD RLKVFLIART DLSSILLNSK TDLLAKNPNA 60
61 DINKISSPLA KAVKSLYRQG GIKAFYVGNG LNVIKVFPES SIKFGSFEVT KKIMTKLEGC 120
121 RDTKDLSKFS TYIAGGLAGM AAQFSVYPID TLKFRVQCAP LDTKLKGNNL LFQTAKDMFR 180
181 EGGLRLFYRG VTVGIVGIFP YAALDLGTFS ALKKWYIAKQ AKTLNLPQDQ VTLSNLVVLP 240
241 MGAFSGTVGA SVVYPINLLR TRLQAQGTYA HPYVYNGFKD VLLKTLEREG YQGLFKGLVP 300
301 TLAKVCPAVS ISYLCYENLK KFMNLE
|
| Detection Method: | |
| Confidence: | 78.221849 |
| Match: | 1okcA |
| Description: | structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside |
Matching Structure (courtesy of the PDB): |
|
