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View Structure Prediction Details

Protein: CE37006
Organism: Caenorhabditis elegans
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37006.

Description E-value Query
Range
Subject
Range
gi|50755587 - gi|50755587|ref|XP_414807.1| PREDICTED: similar to folliculin isoform 1 [Gallus gallus]
665.0 [0..94] [635..190]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAVIALCHF CENHGPRVVM TCQPMRDVDD KGASCTASTS LGPSTSSSPP GIIVPLIKFD  60
   61 GECVVKEKTN TEDGTSYPHY GNCTKFTIDT EDR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSACSSFRNG PCLLSNDHQT KTSYISSEVA LQDRVYERVK NACLRSLSCE VSAASKKNPV  60
   61 QP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [156-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPLSRSTT PRKIHPYVIH EEPLHGTRIP PSSTVLQEPI EDGAFEQPLV LKISEIYFEN  60
   61 IDFRAAEEAD GYVIFGDTDN GFCFAYIFRL ADAKARGFYR LFSLIVVSND LTFLTNNFEY 120
  121 FKTTLGGIKN DLQKLAQDVF SREIDTGEKL SEDDIHKPEF QKLVGKMPSW YRRKIAIDTD 180
  181 RNLTVVTANN DIWVQLHRHM MWTLRSPTLA CLDQVMEGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [375-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTQDMMVLLE LEESQIVELE LRHPNQHLVS MAQLANLKII ATQLNTCSEP GDLDLLIRHI  60
   61 VTGGQVVVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [444-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SREKEYCRQF LLAISNLLPI GCIKLATYKE QYLPEYSSRF NLIGGPHNMD IPLEVSDVMV  60
   61 FRVSPRDVSI VDIEQMSLVN CVIEVRRRPE NDGSNGPLPR IVNRYRDLLL DSDVTDTILE 120
  121 TALRTTREGW MLKAKICYQM TKQLSHPQVF EHITGCGVED QQVVSYWTAG LSNAYKLHVL 180
  181 TSIQQSQTST AR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle