| Protein: | dsl-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 303 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsl-6.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..1] | [302..1568] |
|
Region A: Residues: [1-303] |
1 11 21 31 41 51
| | | | | |
1 MKLIIKYTVL TLFYAQLINC SGYLEVHLRS PHEQPATVNI STDVQNEESN VFEVILKPNV 60
61 VFNVTRIPVD FNKTYNLIIK SEANDGKSKM TMESNLTPRV GLISPIQVTR TFDGLRIIIE 120
121 CDENWFGEKC DVFCDNIEQR LHGKRCNYRG VPSCLNMFTG AGCMKMITPM DCSCKNNGKC 180
181 VDSAETPICE CTRGFKGDTC EEMHETIKAA INVQQEEIGC GGSIHNSIME NLVLNQMREV 240
241 KQDTMFQLLR SLVGAIFGAI SSVLPIDGTL GNAACNNSLV DSVSELDGSG VFPEEGSGIT 300
301 FLD
|
| Detection Method: |  |
| Confidence: | 9.69897 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.44119144078508 | bayes_pls_golite062009 |
| receptor binding | 1.40618339011373 | bayes_pls_golite062009 |
| protein binding | 1.15716342217655 | bayes_pls_golite062009 |
| growth factor activity | 0.25853515067422 | bayes_pls_golite062009 |
