YRC Public Data Repository - Protein Structure Prediction

Protein:	ATP8_ANOGA
Organism:	Anopheles gambiae
Length:	53 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP8_ANOGA.

Description	E-value	Query Range	Subject Range
gi\|28273919, gi\|... - gi\|28273919\|gb\|AAO34318.1\| ATP synthase F0 subunit 8 [Megalagrion oresitrophum], gi\|28273915\|gb\|AAO3... gi\|28273931 - gi\|28273931\|gb\|AAO34327.1\| ATP synthase F0 subunit 8 [Megalagrion orobates]	65.0	[0..1]	[52..1]
ATP8_DROSE - ATP synthase protein 8 OS=Drosophila sechellia GN=mt:ATPase8 PE=3 SV=1	64.0	[0..1]	[53..1]
gi\|28273891, gi\|... - gi\|28273891\|gb\|AAO34297.1\| ATP synthase F0 subunit 8 [Megalagrion nigrohamatum nigrohamatum], gi\|282...	63.0	[0..1]	[52..1]
ATP8_AEDAL - ATP synthase protein 8 OS=Aedes albopictus GN=mt:ATPase8 PE=3 SV=1	63.0	[0..1]	[53..1]
gi\|8573474, gi\|4... - gi\|8573516\|gb\|AAF77358.1\| ATPase 8 [Drosophila simulans], gi\|8573502\|gb\|AAF77345.1\| ATPase 8 [Drosop...	62.0	[0..1]	[53..1]
gi\|13435205, gi\|... - gi\|13435205\|ref\|NP_085085.1\|ATP8_15618 ATP synthase F0 subunit 8 [Chrysomya putoria], gi\|13384221\|gb...	61.0	[0..1]	[53..1]
gi\|89112065 - gi\|89112065\|gb\|ABD60737.1\| ATP synthase F0 subunit 8 [Anopheles funestus]	61.0	[0..1]	[53..1]
gi\|223702 - gi\|223702\|prf\|\|0908303E protein URF A6L	61.0	[0..1]	[53..1]
ATP8_DROYA - ATP synthase protein 8 OS=Drosophila yakuba GN=mt:ATPase8 PE=3 SV=1 gi\|186911341 - gi\|186911341\|gb\|ACC94824.1\| ATPase 8 [Drosophila baimaii]	61.0	[0..1]	[53..1]

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Predicted Domain #1

Region A:
Residues: [1-53]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQMAPINWL ILFIVFSITL VVFNILNYFC FFYTPLKTSQ SLNIKFNKLN WKW

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	8.356547
Match:	PF00895.11
Description:	No description for PF00895.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits