| Protein: | COL6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COL6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
333.0 | [0..2] | [406..1] |
|
|
296.0 | [0..1] | [405..1] |
|
|
277.0 | [0..1] | [405..51] |
|
|
249.0 | [0..1] | [405..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MMKSLASAVG GKTARACDSC VKRRARWYCA ADDAFLCHAC DGSVHSANPL ARRHERVRLK 60
61 SASAGKYRHA SPPHQATWHQ GFTRKARTPR GGKK
|
| Detection Method: |  |
| Confidence: | 0.985 |
| Match: | 2dipA |
| Description: | No description for 2dipA was found. |
|
Region A: Residues: [95-270] |
1 11 21 31 41 51
| | | | | |
1 SHTMVFHDLV PEMSTEDQAE SYEVEEQLIF EVPVMNSMVE EQCFNQSLEK QNEFPMMPLS 60
61 FKSSDEEDDD NAESCLNGLF PTDMELAQFT ADVETLLGGG DREFHSIEEL GLGEMLKIEK 120
121 EEVEEEGVVT REVHDQDEGD ETSPFEISFD YEYTHKTTFD EGEEDEKEDV MKNVME
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [271-406] |
1 11 21 31 41 51
| | | | | |
1 MGVNEMSGGI KEEKKEKALM LRLDYESVIS TWGGQGIPWT ARVPSEIDLD MVCFPTHTMG 60
61 ESGAEAHHHN HFRGLGLHLG DAGDGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP 120
121 RMKGRFVKRS SIGVAH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.232 | N/A | N/A | d.110.4 | SNARE-like |
