| Protein: | COL16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 417 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COL16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..1] | [417..1] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MMKSLANAVG AKTARACDSC VKRRARWYCA ADDAFLCQSC DSLVHSANPL ARRHERVRLK 60
61 TASPAVVKHS NHSSASPPHE VATWHHGFTR KARTPRGSGK KNNSSIFHDL VPDISIEDQT 120
121 DNYELEEQLI CQVPVLD
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 2dfyX |
| Description: | No description for 2dfyX was found. |
|
Region A: Residues: [138-238] |
1 11 21 31 41 51
| | | | | |
1 PLVSEQFLND VVEPKIEFPM IRSGLMIEEE EDNAESCLNG FFPTDMELEE FAADVETLLG 60
61 RGLDTESYAM EELGLSNSEM FKIEKDEIEE EVEEIKAMSM D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.602 | a.3.1 | Cytochrome c |
| View | Download | 0.439 | a.49.1 | C-terminal domain of B transposition protein |
| View | Download | 0.428 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.330 | a.3.1 | Cytochrome c |
| View | Download | 0.291 | a.3.1 | Cytochrome c |
|
Region A: Residues: [239-417] |
1 11 21 31 41 51
| | | | | |
1 IFDDDRKDVD GTVPFELSFD YESSHKTSEE EVMKNVESSG ECVVKVKEEE HKNVLMLRLN 60
61 YDSVISTWGG QGPPWSSGEP PERDMDISGW PAFSMVENGG ESTHQKQYVG GCLPSSGFGD 120
121 GGREARVSRY REKRRTRLFS KKIRYEVRKL NAEKRPRMKG RFVKRASLAA AASPLGVNY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
