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View Structure Prediction Details

Protein: CRYAA_TRASC, CRA...
Organism: Trachemys scripta
Length: 149 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRYAA_TRASC, CRA....

Description E-value Query
Range		 Subject
Range
gi|50344347 - gi|50344347|emb|CAF02101.1| alphaA-crystallin [Elephas maximus]
 143.0 [0..1] [149..1]
CRYAA_PEDCA - Alpha-crystallin A chain OS=Pedetes capensis GN=CRYAA PE=1 SV=1
CRYAA_CAVPO - Alpha-crystallin A chain OS=Cavia porcellus GN=CRYAA PE=1 SV=1
 142.0 [0..1] [149..12]
CRYAA_LOXAF - Alpha-crystallin A chain OS=Loxodonta africana GN=CRYAA PE=1 SV=1
 142.0 [0..1] [149..12]
CRYAA_EULFU - Alpha-crystallin A chain OS=Eulemur fulvus fulvus GN=CRYAA PE=1 SV=1
 142.0 [0..1] [149..12]
CRYAA_OCHPR - Alpha-crystallin A chain OS=Ochotona princeps GN=CRYAA PE=1 SV=1
 142.0 [0..1] [149..12]
CRYAA_PIG - Alpha-crystallin A chain OS=Sus scrofa GN=CRYAA PE=1 SV=1
gi|229520, gi|71441 - pir||CYPGAA alpha-crystallin chain A - pig (tentative sequence), gi|229520|prf||751000F crystallin ...
 142.0 [0..1] [149..12]
CRYAA_ARTJA - Alpha-crystallin A chain OS=Artibeus jamaicensis GN=CRYAA PE=1 SV=1
 142.0 [0..1] [149..12]
CRYAA_PTEPO - Alpha-crystallin A chain OS=Pteropus poliocephalus GN=CRYAA PE=1 SV=1
 141.0 [0..1] [149..12]
CRYAA_RABIT - Alpha-crystallin A chain OS=Oryctolagus cuniculus GN=CRYAA PE=1 SV=3
 141.0 [0..1] [149..12]
CRYAA_HIPAM - Alpha-crystallin A chain OS=Hippopotamus amphibius GN=CRYAA PE=1 SV=1
CRYAA_GIRCA - Alpha-crystallin A chain OS=Giraffa camelopardalis GN=CRYAA PE=1 SV=1
 141.0 [0..1] [149..12]

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Predicted Domain #1
Region A:
Residues: [1-149] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RALGPLFPSR LFDQYLGEGL FDYDLLPFFS STISPYYRHS LFRTVLESGI SEVRSDRDKF  60
   61 TILLDVKHFS PEDLSVKIMD DFVEIHGKHN ERQDDHGYIS REFHRRYRLP SNVDQSAITC 120
  121 SLSADGMLTF SGPKVQSNMD TSYSERPIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.3360635562029 bayes_pls_golite062009
protein binding 0.743263427072441 bayes_pls_golite062009
unfolded protein binding 0.540503020005284 bayes_pls_golite062009
catalytic activity 0.260308151913118 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle