YRC Public Data Repository - Protein Structure Prediction

Protein:	CRCB_PYRHO
Organism:	Pyrococcus horikoshii
Length:	123 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRCB_PYRHO.

Description	E-value	Query Range	Subject Range
gi\|67545817, gi\|... - gi\|67545817\|ref\|ZP_00423736.1\| Camphor resistance CrcB protein [Burkholderia vietnamiensis G4], gi\|6...	111.0	[0..3]	[121..99]
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	110.0	[0..4]	[121..11]
CRCB_PYRFU - Putative fluoride ion transporter CrcB OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 84... CRCB_PYRFU - Protein crcB homolog OS=Pyrococcus furiosus GN=crcB PE=3 SV=1	110.0	[0..1]	[123..1]
gi\|89321322, gi\|... - gi\|89337738\|ref\|ZP_01190516.1\| Camphor resistance CrcB protein [Mycobacterium flavescens PYR-GCK], g...	109.0	[0..1]	[123..3]
CRCB1_BACC1 - Putative fluoride ion transporter CrcB 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=crcB1 P...	109.0	[0..1]	[121..1]
CRCB_OCEIH - Protein crcB homolog OS=Oceanobacillus iheyensis GN=crcB PE=3 SV=1 CRCB_OCEIH - Putative fluoride ion transporter CrcB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / K...	109.0	[0..4]	[121..2]
gi\|88941515, gi\|... - gi\|88941515\|ref\|ZP_01146929.1\| crcB protein [Acidiphilium cryptum JF-5], gi\|88919772\|gb\|EAR38909.1\| ...	109.0	[0..3]	[122..70]
gi\|47555936, gi\|... - gi\|47567315\|ref\|ZP_00238028.1\| crcB protein [Bacillus cereus G9241], gi\|47555936\|gb\|EAL14274.1\| crcB...	108.0	[0..1]	[121..1]
gi\|30692518, gi\|... - gi\|30692518\|gb\|AAP33390.1\| CrcB [Bacillus thuringiensis serovar aizawai], gi\|221665115\|gb\|ACM24761.1...	108.0	[0..4]	[121..29]
CRCB1_BACHK - Putative fluoride ion transporter CrcB 1 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) G... CRCB1_BACHK - Protein CrcB homolog 1 OS=Bacillus thuringiensis subsp. konkukian GN=crcB1 PE=3 SV=1	108.0	[0..1]	[121..1]

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Predicted Domain #1

Region A:
Residues: [1-123]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAKIIALLI IGGGLGALTR YYISGVLPVY KDFPIGTLIV NSLASFLLGY IYGLLFSGFD  60
   61 ISPEWRIFLG TGFCGGLSTF STFSYETFSL LREGEIWLAF ANITTNILVT IFLVFLGFIL 120
  121 ARR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	58.045757
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.994	N/A	N/A	a.7.12	Description not found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits