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View Structure Prediction Details

Protein: DAD1_SOLLC
Organism: Solanum lycopersicum
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_SOLLC.

Description E-value Query
Range
Subject
Range
gi|29423681 - gi|29423681|gb|AAO73434.1| DAD1 [Petunia x hybrida]
173.0 [0..1] [116..1]
gi|92898955 - gi|92898955|gb|ABE94463.1| Defender against death DAD protein [Medicago truncatula]
171.0 [0..1] [116..1]
DAD1_PEA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pisum sativum GN=DAD1...
171.0 [0..1] [116..1]
gi|13548685 - gi|13548685|dbj|BAB40808.1| homolog of defender against apoptotic death 1 homolog [Nicotiana suaveol...
171.0 [0..1] [116..1]
gi|106879663 - gi|106879663|emb|CAJ42302.1| defender against apoptotic death 1 [Plantago major]
167.0 [0..5] [116..5]
gi|25313138 - gi|25313138|pir||F84769 defender against cell death protein [imported] - Arabidopsis thaliana
165.0 [0..5] [116..49]
DAD1_CITUN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Citrus unshiu GN=DAD1...
165.0 [0..5] [116..4]
DAD1_PICMA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Picea mariana GN=DAD1...
164.0 [0..4] [116..3]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSSATKDA QALFHSLRSA YAATPTNLKI IDLYVIFAIS TALIQVVYMA IVGSFPFNSF  60
   61 LSGVLSCIGT AVLAVCLRIQ VNKENKEFKD LPPERAFADF VLCNLVLHLV IMNFLG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.853872
Match: PF02109.7
Description: No description for PF02109.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.994 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.994 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.985 N/A N/A a.24.3 Cytochromes
View Download 0.967 N/A N/A a.8.3 Families 57/38 glycoside transferase middle domain
View Download 0.962 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.942 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.942 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.932 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.917 N/A N/A a.7.8 GAT domain
View Download 0.911 N/A N/A a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle