YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD1_PICMA
Organism:	Picea mariana
Length:	115 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_PICMA.

Description	E-value	Query Range	Subject Range
gi\|92898955 - gi\|92898955\|gb\|ABE94463.1\| Defender against death DAD protein [Medicago truncatula]	175.0	[0..1]	[115..1]
DAD1_PEA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pisum sativum GN=DAD1...	169.0	[0..2]	[115..4]
gi\|106879663 - gi\|106879663\|emb\|CAJ42302.1\| defender against apoptotic death 1 [Plantago major]	169.0	[0..1]	[115..2]
DAD1_ARATH - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Arabidopsis thaliana ...	167.0	[0..1]	[115..1]
gi\|29423681 - gi\|29423681\|gb\|AAO73434.1\| DAD1 [Petunia x hybrida]	165.0	[0..3]	[115..4]
DAD1_BETPN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Betula pendula GN=DAD...	165.0	[0..1]	[115..1]
DAD1_CITUN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Citrus unshiu GN=DAD1...	165.0	[0..1]	[115..1]
gi\|4106446 - gi\|4106446\|gb\|AAD02848.1\| defender against apoptotic death 1 homolog [Populus tremula x Populus trem...	164.0	[0..1]	[115..1]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSTAKEAH ALIASLRSAY SATPTKLKII DLYVVYAILT AVVQVVYMAI VGSFPFNAFL  60
   61 SGVLSCTGTA VLAVCLRMQV NKENREFKDL PPERAFADFV LCNLVLHLVI MNFLG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	66.619789
Match:	PF02109.7
Description:	No description for PF02109.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.980	N/A	N/A	a.7.8	GAT domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits