| Protein: | ETOL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 925 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETOL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
462.0 | [0..61] | [921..1] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MRNLKLFERF KSTQVHAFTT QDSPSTSSNG SPRMMKFLGH PKSKSRSLLP HGFPTTDLLE 60
61 PPLDSYLKPI DLVESLSNLY RRIESSSESE ASMLYLEQYA VLRSLGDAKL LRRCLLNARR 120
121 HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [171-324] |
1 11 21 31 41 51
| | | | | |
1 NVDDEGCECS TVCEDEFGSD DVKISKADEF SGLDEVSDIS FCVGSEKAKC VRSRIAALSR 60
61 PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF 120
121 CCDDLKSECE ARLAASVTDL DKALTFVEYA LEER
|
| Detection Method: | |
| Confidence: | 11.522879 |
| Match: | 2ppiA |
| Description: | No description for 2ppiA was found. |
|
Region A: Residues: [325-382] |
1 11 21 31 41 51
| | | | | |
1 TTLLLSACLQ VFLRELPQSL HNPKVMRFFC SSEAKEQLAF LGSECVFLLY YFLSQVGM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [383-501] |
1 11 21 31 41 51
| | | | | |
1 EEKLTTDTML ILLERTREFA RTNWQKALSL HQMGCVLFER KDYKAAQFHF RLASSLGHVY 60
61 SLAGVSRTEY KQGKRYSAYR LMNFLISNHK PHGWMYQERS LYNVGVEKLK DLATATELD
|
| Detection Method: | |
| Confidence: | 25.30103 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [502-925] |
1 11 21 31 41 51
| | | | | |
1 PTLSFPYKYR AVMKFEQKQI KEAFQEIDRL IQFKLSPECL ELRAWLYLAT GDRESCLRDL 60
61 RAVLSLEPNY VVFGGKMRDD LVEALTAQCI EVESEADCWV RLFDRWSAVD DVASLAVVHQ 120
121 MLQNDPSKNF LRFRQSLLLL RLNCQGAAMR CLRMAWNLAT SEAERLVYEG WLLYDMGYVE 180
181 ETLTKAEEAI SIQRSFEAFF LKAYALADKN LDADEISCVV QVLEEALKCP SDGLRKGQAL 240
241 NNLGSIYINL GMLDQAETAY KNAIEIKHIR ARQGLARVYF LKNQRKEACE EMTKLIEKSC 300
301 SKAAAYEKRS EYCEREKAKE DLDMATTLDP LRTYPYRYRA AVLMDDQRET EAVEELSKAI 360
361 AFRPELQTLH LRAAFHEATG NLSLATQDCE AALCLDPNHT ETLHLYSRSK DQASSIDNTI 420
421 FGLD
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
