YRC Public Data Repository - Protein Structure Prediction

Protein:	FOLB_ECOLI
Organism:	Escherichia coli
Length:	122 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FOLB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|58583747, gi\|... - gi\|58583747\|ref\|YP_202763.1\| dihydroneopterin aldolase [Xanthomonas oryzae pv. oryzae KACC10331], gi...	148.0	[0..1]	[118..24]
gi\|90311658, gi\|... - gi\|90407235\|ref\|ZP_01215422.1\| dihydroneopterin aldolase [Psychromonas sp. CNPT3], gi\|90311658\|gb\|EA...	147.0	[0..1]	[117..1]
gi\|66770185, gi\|... - gi\|66770185\|ref\|YP_244947.1\| dihydroneopterin aldolase [Xanthomonas campestris pv. campestris str. 8... gi\|21233243, gi\|... - gi\|21233243\|ref\|NP_639160.1\| dihydroneopterin aldolase [Xanthomonas campestris pv. campestris str. A...	147.0	[0..1]	[117..1]
gi\|146272636, gi... - gi\|98660150\|dbj\|GAA02558.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476765...	146.0	[0..1]	[121..21]
gi\|153819106, gi... - gi\|153819106\|ref\|ZP_01971773.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae NCTC 8457]... gi\|125617384 - gi\|125617384\|gb\|EAZ45952.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae MO10] gi\|227008595, gi... - gi\|227080707\|ref\|YP_002809258.1\| putative dihydroneopterin aldolase FolB [Vibrio cholerae M66-2], gi... gi\|9654950, gi\|1... - gi\|9654950\|gb\|AAF93692.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae O1 biovar El Tor... gi\|126518706, gi... - gi\|153823781\|ref\|ZP_01976448.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae B33], gi\|1... gi\|11270209 - pir\|\|C82313 probable dihydroneopterin aldolase FolB VC0524 [imported] - Vibrio cholerae (strain N169... gi\|121590692, gi... - gi\|121590692\|ref\|ZP_01678025.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae 2740-80], ... gi\|153223810, gi... - gi\|153223810\|ref\|ZP_01954065.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae MAK 757], ... gi\|149739230, gi... - gi\|153826927\|ref\|ZP_01979594.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae MZO-2], gi... gi\|121629158, gi... - gi\|121728546\|ref\|ZP_01681568.1\| dihydroneopterin aldolase FolB, putative [Vibrio cholerae V52], gi\|1... gi\|227012350, gi... - gi\|227116900\|ref\|YP_002818796.1\| putative dihydroneopterin aldolase FolB [Vibrio cholerae O395], gi\|...	145.0	[0..1]	[117..13]
gi\|68347245, gi\|... - gi\|70732946\|ref\|YP_262717.1\| dihydroneopterin aldolase [Pseudomonas fluorescens Pf-5], gi\|68347245\|g...	145.0	[0..1]	[115..1]
gi\|94499958, gi\|... - gi\|94499958\|ref\|ZP_01306493.1\| Dihydroneopterin aldolase family protein [Oceanobacter sp. RED65], gi...	145.0	[0..1]	[118..1]
gi\|21244594, gi\|... - gi\|21244594\|ref\|NP_644176.1\| dihydroneopterin aldolase [Xanthomonas axonopodis pv. citri str. 306], ...	145.0	[0..1]	[118..1]
gi\|209920529, gi... - gi\|209920529\|ref\|YP_002294613.1\| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphat... gi\|882580, gi\|74... - gi\|882580\|gb\|AAA89138.1\| alternate name ygiG; ORF_f123, gi\|7428427\|pir\|\|H65093 probable dihydroneopt... gi\|1789438, gi\|1... - gb\|AAC76094.1\| putative kinase; dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'... gi\|24053522, gi\|... - ref\|NP_708868.1\| putative kinase [Shigella flexneri 2a str. 301], gb\|AAN44575.1\| putative kinase [S... gi\|226899221, gi... - gi\|237706181\|ref\|ZP_04536662.1\| dihydroneopterin aldolase [Escherichia sp. 3_2_53FAA], gi\|226899221\|... gi\|26110067, gi\|... - gi\|26249639\|ref\|NP_755679.1\| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'... gi\|91212486, gi\|... - gi\|91212486\|ref\|YP_542472.1\| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'... gi\|254038226, gi... - gi\|254038226\|ref\|ZP_04872284.1\| dihydroneopterin aldolase [Escherichia sp. 1_1_43], gi\|226839850\|gb\|... gi\|82778390, gi\|... - gi\|82778390\|ref\|YP_404739.1\| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'... gi\|81246723, gi\|... - gi\|82545312\|ref\|YP_409259.1\| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'... gi\|882580\|gb\|AAA... - alternate name ygiG; ORF_f123	145.0	[0..1]	[122..2]
gi\|84625557, gi\|... - gi\|84625557\|ref\|YP_452929.1\| dihydroneopterin aldolase [Xanthomonas oryzae pv. oryzae MAFF 311018], ...	145.0	[0..1]	[118..1]

Back

Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIVFIEQLS VITTIGVYDW EQTIEQKLVF DIEMAWDNRK AAKSDDVADC LSYADIAETV  60
   61 VSHVEGARFA LVERVAEEVA ELLLARFNSP WVRIKLSKPG AVARAANVGV IIERGNNLKE 120
  121 NN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.0
Match:	1nbuA
Description:	7,8-Dihydroneopterin Aldolase Complexed with Product From Mycobacterium Tuberculosis
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits