| Protein: | RR12_LOBMA |
| Organism: | Lobularia maritima |
| Length: | 123 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RR12_LOBMA.
| Description | E-value | Query Range |
Subject Range |
|
|
208.0 | [0..1] | [123..42] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MPTIKQLIRN TRQPIRNVTK SPALRGCPQR RGTCTRVYTI TPKKPNSALR KVARVRLTSG 60
61 FEITAYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG TLDAVGVKDR QQGRSKYGVK 120
121 KPK
|
| Detection Method: |  |
| Confidence: | 51.0 |
| Match: | 1vs5L |
| Description: | No description for 1vs5L was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.45319063235379 | bayes_pls_golite062009 |
| structural molecule activity | 6.87843523680097 | bayes_pls_golite062009 |
| misfolded RNA binding | 4.4877915495248 | bayes_pls_golite062009 |
| nucleic acid binding | 3.63363905192127 | bayes_pls_golite062009 |
| RNA binding | 3.30183895019873 | bayes_pls_golite062009 |
| DNA binding | 2.84579720873153 | bayes_pls_golite062009 |
| 2.80746531284205 | bayes_pls_golite062009 | |
| binding | 2.40532042551671 | bayes_pls_golite062009 |
| mRNA binding | 1.65819015373151 | bayes_pls_golite062009 |
| translation regulator activity | 1.46320772716954 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.40718318783582 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| protein binding | 1.20309946451799 | bayes_pls_golite062009 |
| transcription regulator activity | 1.1059706841002 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.10289736160471 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.96886436248958 | bayes_pls_golite062009 |
| transcription factor activity | 0.540940243804807 | bayes_pls_golite062009 |
| ribonuclease activity | 0.498439111185072 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| transcription activator activity | 0.458219339846021 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.438266295385131 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.39131721416336 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.23198185345804 | bayes_pls_golite062009 |
| nuclease activity | 0.17660139576327 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.0717589400404304 | bayes_pls_golite062009 |
