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View Structure Prediction Details

Protein: GANAB
Organism: Homo sapiens
Length: 944 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GANAB.

Description E-value Query
Range
Subject
Range
gi|76657688 - gi|76657688|ref|XP_591861.2| PREDICTED: similar to alpha glucosidase II alpha subunit isoform 2 [Bos...
0.0 [1..944] [41..984]
gi|109105748 - gi|109105748|ref|XP_001116402.1| PREDICTED: similar to alpha glucosidase II alpha subunit isoform 2 ...
0.0 [14..944] [14..944]
gi|2274968 - gi|2274968|emb|CAA04006.1| Glucosidase II [Homo sapiens]
0.0 [14..944] [14..944]
gi|114638031 - gi|114638031|ref|XP_001154003.1| PREDICTED: alpha glucosidase II alpha subunit isoform 4 [Pan troglo...
0.0 [15..944] [15..944]
GANAB_MACFA - Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1
0.0 [14..944] [14..944]
gi|55731394|emb|... - hypothetical protein [Pongo pygmaeus]
gi|55731394 - gi|55731394|emb|CAH92411.1| hypothetical protein [Pongo abelii]
0.0 [14..944] [14..966]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVAAVAAR RRRSWASLVL AFLGVCLGIT LAVDRSNFKT CEESSFCKRQ RSIRPGLSPY  60
   61 RALLDSLQLG PDSLTVHLIH EVTKVLLVLE LQGLQKNMTR FRIDELEPRR PRYRVPDVLV 120
  121 ADPPIARLSV SGRDENSVEL TMAEGPYKII LTARPFRLDL LEDRSLLLSV NARGLLEFEH 180
  181 QRA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-847]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVSQGSKDP AEGDGAQPEE TPRDGDKPEE TQGKAEKDEP GAWEETFKTH SDSKPYGPMS  60
   61 VGLDFSLPGM EHVYGIPEHA DNLRLKVTEG GEPYRLYNLD VFQYELYNPM ALYGSVPVLL 120
  121 AHNPHRDLGI FWLNAAETWV DISSNTAGKT LFGKMMDYLQ GSGETPQTDV RWMSETGIID 180
  181 VFLLLGPSIS DVFRQYASLT GTQALPPLFS LGYHQSRWNY RDEADVLEVD QGFDDHNLPC 240
  241 DVIWLDIEHA DGKRYFTWDP SRFPQPRTML ERLASKRRKL VAIVDPHIKV DSGYRVHEEL 300
  301 RNLGLYVKTR DGSDYEGWCW PGSAGYPDFT NPTMRAWWAN MFSYDNYEGS APNLFVWNDM 360
  361 NEPSVFNGPE VTMLKDAQHY GGWEHRDVHN IYGLYVHMAT ADGLRQRSGG MERPFVLARA 420
  421 FFAGSQRFGA VWTGDNTAEW DHLKISIPMC LSLGLVGLSF CGADVGGFFK NPEPELLVRW 480
  481 YQMGAYQPFF RAHAHLDTGR REPWLLPSQH NDIIRDALGQ RYSLLPFWYT LLYQAHREGI 540
  541 PVMRPLWVQY PQDVTTFNID DQYLLGDALL VHPVSDSGAH GVQVYLPGQG EVWYDIQSYQ 600
  601 KHHGPQTLYL PVTLSSIPVF QRGGTIVPRW MRVRRSSECM KDDPITLFVA LSPQGTAQGE 660
  661 LFLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 146.0
Match: 2g3mA
Description: No description for 2g3mA was found.

Predicted Domain #3
Region A:
Residues: [848-944]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGHTFNYQTR QEFLLRRFSF SGNTLVSSSA DPEGHFETPI WIERVVIIGA GKPAAVVLQT  60
   61 KGSPESRLSF QHDPETSVLV LRKPGINVAS DWSIHLR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle