YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|151944089
Organism: Saccharomyces cerevisiae YJM789
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151944089.

Description E-value Query
Range
Subject
Range
gi|151944089 - gi|151944089|gb|EDN62382.1| daughter-specific expression-related protein [Saccharomyces cerevisiae Y...
DSE2 - Daughter cell-specific secreted protein with similarity to glucanases, degrades cell wall from the d...
DSE2_YEAST - Protein DSE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DSE2 PE=1 SV=1
5.0E-58 [1..325] [1..325]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-11 [75..281] [1069..1288]
gi|55742055 - ref|NP_001007209.1| coagulation factor V [Danio rerio]
gi|55742055, gi|... - gi|55742055|ref|NP_001007209.1| coagulation factor V [Danio rerio], gi|16200178|emb|CAC94896.1| nove...
5.0E-9 [86..318] [970..1221]
ZNF236 - zinc finger protein 236
1.0E-6 [49..262] [1430..1656]
ARNT_RAT - Aryl hydrocarbon receptor nuclear translocator OS=Rattus norvegicus GN=Arnt PE=1 SV=2
5.0E-5 [47..211] [523..708]
gi|16271972 - gi|16271972|gb|AAA86616.2| envelope glycoprotein precursor [Crimean-Congo hemorrhagic fever virus]
5.0E-5 [66..232] [81..245]

Back

Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFNFSTIFN ILFFLFTLIE ANSNGETVKL ITSDGIVYSY AVYTKTLAPA RVVVKTISYT  60
   61 TTRVYPITLA NSVVSSTTEK ITEVSTVSAS EQVSATQTNS LVSTSTVSTI SPTISSGSST 120
  121 SSSSTYDIES SQSIESSGTS SATAEPSASS GFRLTSSSAF VSSTAPFSSQ LSSSSSSETS 180
  181 SSSFSTSSSS APLSLTSSSS SSSSFATI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1acc__
Description: Anthrax protective antigen
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [209-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITLAPSSSKS GNSQLTLASS SSTSAVESSQ TGSTIARTTS TLVPSSSVDT TSRATTSMPL  60
   61 ESSSTQSISV SSSDGTCYVF YDDDDYYSTV YLTNPSQSVD AATTITSTNT IYATVTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle