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View Structure Prediction Details

Protein: LEA5A_GOSHI
Organism: Gossypium hirsutum
Length: 105 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEA5A_GOSHI.

Description E-value Query
Range
Subject
Range
LEA5D_GOSHI - Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1
140.0 [0..1] [105..1]
gi|7489163, gi|2... - pir||T01984 late-embryogenesis protein lea5 - common tobacco, gi|2981167|gb|AAC06242.1| late embryog...
134.0 [0..1] [105..1]
gi|3193289, gi|7... - pir||T01312 hypothetical protein T14P8.2 - Arabidopsis thaliana, gi|7268998|emb|CAB80731.1| AT4g023...
132.0 [0..1] [102..110]
gi|255627541, gi... - pir||T08871 desiccation protective protein LEA5 - soybean, gi|255627541|gb|ACU14115.1| unknown [Gly...
124.0 [0..1] [100..1]
LEA5_CITSI - Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1
122.0 [0..1] [105..1]
gi|1370589 - gi|1370589|emb|CAA66948.1| protein induced upon tuberization [Solanum demissum]
121.0 [0..1] [104..1]
gi|76573297, gi|... - gi|77999305|gb|ABB16999.1| unknown [Solanum tuberosum], gi|76573297|gb|ABA46753.1| unknown [Solanum ...
121.0 [0..1] [104..1]
gi|90404835, gi|... - gi|90404835|gb|ABD93883.1| group 5 late embryogenesis abundant protein [Citrus unshiu], gi|90404816|...
121.0 [0..1] [105..1]
gi|1172167, gi|7... - pir||T07161 late-embryogenesis protein homolog - tomato, gi|170507|gb|AAA34193.1| ORF, gi|1172167|g...
120.0 [0..1] [104..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSVSSFKF LGASVFDALY VSISRRGYSG APPAAVTASF GRPGAMGKVE RRYAMKESSS  60
   61 SETRAYSSAW APDPVTGYYR PENCGAEIDA ADLREMMLNH RVRSQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.79588
Match: PF03242.4
Description: No description for PF03242.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.690 N/A N/A a.24.20 Description not found.
View Download 0.544 N/A N/A a.24.28 Description not found.
View Download 0.515 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.487 N/A N/A a.29.2 Bromodomain
View Download 0.487 N/A N/A a.29.2 Bromodomain
View Download 0.460 N/A N/A a.24.3 Cytochromes
View Download 0.446 N/A N/A c.44.2 Enzyme IIB-cellobiose
View Download 0.435 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.431 N/A N/A a.24.3 Cytochromes
View Download 0.429 N/A N/A c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.380 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.298 N/A N/A d.17.4 NTF2-like
View Download 0.290 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.243 N/A N/A a.278.1 Description not found.
View Download 0.224 N/A N/A a.74.1 Cyclin-like


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