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View Structure Prediction Details

Protein: MS2B_DROMA
Organism: Drosophila mauritiana
Length: 90 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MS2B_DROMA.

Description E-value Query
Range
Subject
Range
MS2B_DROSI - Accessory gland-specific peptide 26Ab OS=Drosophila simulans GN=Acp26Ab PE=2 SV=1
167.0 [0..1] [90..1]
gi|46488074 - gi|46488074|gb|AAS99379.1| accessory gland protein 26Ab [Drosophila sechellia]
157.0 [0..1] [90..1]
gi|46488190 - gi|46488190|gb|AAS99437.1| accessory gland protein 26Ab [Drosophila mauritiana]
154.0 [0..1] [90..1]
gi|4456064, gi|4... - gi|8258|emb|CAA50249.1| Mst26Ab [Drosophila melanogaster], gi|4467390|emb|CAB37624.1| Acp26Ab [Droso...
152.0 [0..1] [90..1]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFAVLCIF SCICLWQFSD AAPFISVQSS SQSRSQKVMN GMLRTLYDYS VQDSVNDATG  60
   61 HLIHTHKADF NSDVMSPEEI ERVRQQLNMA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.21467
Match: PF05777.3
Description: No description for PF05777.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.778 N/A N/A a.64.1 Saposin
View Download 0.778 N/A N/A a.64.1 Saposin
View Download 0.713 N/A N/A a.292.1 Description not found.
View Download 0.707 N/A N/A d.375.1 Description not found.
View Download 0.621 N/A N/A a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.621 N/A N/A a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.609 N/A N/A a.292.1 Description not found.
View Download 0.541 N/A N/A a.46.1 Methionine synthase domain
View Download 0.496 N/A N/A d.95.2 Homing endonucleases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle