YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MS2B_DROSI
Organism: Drosophila simulans
Length: 90 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MS2B_DROSI.

Description E-value Query
Range
Subject
Range
gi|46488074 - gi|46488074|gb|AAS99379.1| accessory gland protein 26Ab [Drosophila sechellia]
155.0 [0..1] [90..1]
MS2B_DROMA - Accessory gland-specific peptide 26Ab OS=Drosophila mauritiana GN=Acp26Ab PE=2 SV=1
155.0 [0..1] [90..1]
gi|45825868, gi|... - gi|45825870|gb|AAS77600.1| Mst26Ab [Drosophila simulans], gi|45825868|gb|AAS77599.1| Mst26Ab [Drosop...
gi|46488196, gi|... - gi|46488196|gb|AAS99440.1| accessory gland protein 26Ab [Drosophila mauritiana], gi|46488194|gb|AAS9...
153.0 [0..1] [90..1]
gi|4456064, gi|4... - gi|8258|emb|CAA50249.1| Mst26Ab [Drosophila melanogaster], gi|4467390|emb|CAB37624.1| Acp26Ab [Droso...
152.0 [0..1] [90..1]

Back

Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFAVLCIF SCICFWQFSD AAPFISVQSS SQARSQKVMN GMLRTLYDYS VQDSVNDATG  60
   61 HLIHTHKADF NSDVMSPDEI ESVRQQLNMA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.481486
Match: PF05777.3
Description: No description for PF05777.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.623 N/A N/A a.28.1 ACP-like
View Download 0.603 N/A N/A a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.603 N/A N/A a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.546 N/A N/A a.242.1 Description not found.
View Download 0.530 N/A N/A c.55.4 Translational machinery components
View Download 0.518 N/A N/A d.137.1 Monooxygenase (hydroxylase) regulatory protein
View Download 0.511 N/A N/A a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.511 N/A N/A a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.496 N/A N/A a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle