Protein: | MUKF_ECOLI |
Organism: | Escherichia coli |
Length: | 440 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUKF_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
809.0 | [0..1] | [440..1] |
|
809.0 | [0..1] | [440..1] |
|
809.0 | [0..1] | [440..1] |
|
808.0 | [0..1] | [440..1] |
|
807.0 | [0..1] | [440..1] |
|
807.0 | [0..1] | [440..1] |
|
807.0 | [0..1] | [440..1] |
|
806.0 | [0..1] | [440..1] |
|
806.0 | [0..1] | [440..1] |
|
804.0 | [0..1] | [440..1] |
Region A: Residues: [1-290] |
1 11 21 31 41 51 | | | | | | 1 MSEFSQTVPE LVAWARKNDF SISLPVDRLS FLLAVATLNG ERLDGEMSEG ELVDAFRHVS 60 61 DAFEQTSETI GVRANNAIND MVRQRLLNRF TSEQAEGNAI YRLTPLGIGI TDYYIRQREF 120 121 STLRLSMQLS IVAGELKRAA DAAEEGGDEF HWHRNVYAPL KYSVAEIFDS IDLTQRLMDE 180 181 QQQQVKDDIA QLLNKDWRAA ISSCELLLSE TSGTLRELQD TLEAAGDKLQ ANLLRIQDAT 240 241 MTHDDLHFVD RLVFDLQSKL DRIISWGQQS IDLWIGYDRH VHKFIRTAID |
Detection Method: | |
Confidence: | 154.0 |
Match: | 1t98A |
Description: | Crystal Structure of MukF(1-287) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transcription regulator activity | 0.973857124068741 | bayes_pls_golite062009 |
nucleic acid binding | 0.802843603200847 | bayes_pls_golite062009 |
DNA binding | 0.748163465268532 | bayes_pls_golite062009 |
transcription factor activity | 0.102759346011281 | bayes_pls_golite062009 |
Region A: Residues: [291-440] |
1 11 21 31 41 51 | | | | | | 1 MDKNRVFAQR LRQSVQTYFD EPWALTYANA DRLLDMRDEE MALRDEEVTG ELPEDLEYEE 60 61 FNEIREQLAA IIEEQLAVYK TRQVPLDLGL VVREYLSQYP RARHFDVARI VIDQAVRLGV 120 121 AQADFTGLPA KWQPINDYGA KVQAHVIDKY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.