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View Structure Prediction Details

Protein: NPY_MACMU
Organism: Macaca mulatta
Length: 97 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPY_MACMU.

Description E-value Query
Range
Subject
Range
PYYA_DANRE - Peptide YY-A OS=Danio rerio GN=pyya PE=2 SV=1
159.0 [0..1] [97..1]
NPY_TYPNA - Pro-neuropeptide Y OS=Typhlonectes natans GN=npy PE=1 SV=1
157.0 [0..1] [97..1]
NPY_CHICK - Pro-neuropeptide Y OS=Gallus gallus GN=NPY PE=3 SV=1
157.0 [0..1] [97..1]
NPY_XENLA - Pro-neuropeptide Y OS=Xenopus laevis GN=npy PE=3 SV=1
156.0 [0..1] [97..1]
gi|112419089, gi... - gi|134024445|gb|AAI35388.1| Neuropeptide Y [Xenopus tropicalis], gi|118405076|ref|NP_001072530.1| ne...
156.0 [0..1] [97..1]
NPY_MOUSE - Pro-neuropeptide Y OS=Mus musculus GN=Npy PE=1 SV=2
155.0 [0..1] [97..1]
NPY_RAT - Pro-neuropeptide Y OS=Rattus norvegicus GN=Npy PE=1 SV=1
154.0 [0..1] [97..2]
gi|124000283, gi... - gi|124000283|gb|ABM87650.1| neuropeptide Y [synthetic construct], gi|123993319|gb|ABM84261.1| neurop...
HGNC:7955|MIM:16... - Y
NPY - neuropeptide Y
154.0 [0..1] [97..1]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSKRLGLS GLTLALSLLV CLGALAEAYP SKPDNPGEDA PAEDMARYYS ALRHYINLIT  60
   61 RQRYGKRSSP ETLISDLLMR ESTENVPRTR LEDPSMW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.634 a.47.2 t-snare proteins
View Download 0.634 a.47.2 t-snare proteins
View Download 0.570 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.538 a.47.2 t-snare proteins
View Download 0.538 a.47.2 t-snare proteins
View Download 0.453 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.447 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.375 f.15.1 Small-conductance potassium channel
View Download 0.373 a.7.8 GAT domain
View Download 0.341 a.77.1 DEATH domain
View Download 0.256 a.7.8 GAT domain
View Download 0.249 a.16.1 S15/NS1 RNA-binding domain
View Download 0.245 a.7.8 GAT domain
View Download 0.241 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle