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View Structure Prediction Details

Protein: REV_HV1BR
Organism: Human immunodeficiency virus type 1 (BRU ISOLATE)
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REV_HV1BR.

Description E-value Query
Range
Subject
Range
gi|15788265 - gi|15788265|gb|AAL07716.1| rev protein [Human immunodeficiency virus 1]
231.0 [0..1] [116..1]
REV_HV1B1 - Protein Rev OS=Human immunodeficiency virus type 1 group M subtype B (isolate BH10) GN=rev PE=1 SV=1
gi|16798508 - gi|16798508|gb|AAL29461.1| rev protein [synthetic construct]
gi|326387 - gi|326387|gb|AAA44200.1| rev protein [Human immunodeficiency virus 1]
205.0 [0..1] [116..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRSGDSDE DLLKAVRLIK FLYQSNPPPN PEGTRQARRN RRRRWRERQR QIHSISERIL  60
   61 STYLGRSAEP VPLQLPPLER LTLDCNEDCG TSGTQGVGSP QILVESPTVL ESGTKE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.022276
Match: PF00424.9
Description: No description for PF00424.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.930 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.930 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.810 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.810 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.747 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.739 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.726 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.711 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.711 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.627 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
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