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View Structure Prediction Details

Protein: RL11_CHRVO
Organism: Chromobacterium violaceum
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL11_CHRVO.

Description E-value Query
Range
Subject
Range
RL11_ALKEH - 50S ribosomal protein L11 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) G...
213.0 [0..1] [143..1]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKIVGYIK LQVPAGKANP SPPIGPALGQ RGLNIMEFCK AFNAQTQGME PGMPIPVVIT  60
   61 AYADKSFTFT MKTPPATFLL KKAAGIKSGS AKAHVDKVGK VTRAQLEEIA KTKQADLTAA 120
  121 DLDAAVRTIA GSARSMGLEV EGV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1giyL
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle