Protein: | SMPA_VIBCH |
Organism: | Vibrio cholerae |
Length: | 119 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMPA_VIBCH.
Description | E-value | Query Range |
Subject Range |
|
158.0 | [0..1] | [118..1] |
|
154.0 | [0..1] | [119..18] |
|
154.0 | [0..1] | [118..1] |
|
154.0 | [0..1] | [118..1] |
|
153.0 | [0..1] | [118..1] |
|
153.0 | [0..1] | [118..1] |
|
152.0 | [0..1] | [118..1] |
|
151.0 | [0..1] | [118..1] |
|
150.0 | [0..1] | [118..1] |
|
147.0 | [0..2] | [119..1] |
Region A: Residues: [1-119] |
1 11 21 31 41 51 | | | | | | 1 MQFTKWFIAL PLAVTALSGC SLLERLVYRI DINQGNYVDQ QSVDQLKFGM SKDQVRFVLG 60 61 SPMLVENGYP DTWYYIYHHT QGHNDPVQKN LIVKFNDGGK LVNVAGDFPA GDSFFEGVN |
Detection Method: | |
Confidence: | 42.0 |
Match: | PF04355.4 |
Description: | No description for PF04355.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.769 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.516 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.493 | N/A | N/A | b.61.1 | Avidin/streptavidin |
View | Download | 0.481 | N/A | N/A | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
View | Download | 0.454 | N/A | N/A | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
View | Download | 0.394 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.381 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
View | Download | 0.312 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.292 | N/A | N/A | d.17.4 | NTF2-like |
View | Download | 0.276 | N/A | N/A | d.17.4 | NTF2-like |