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View Structure Prediction Details

Protein: YDAG_ECOLI
Organism: Escherichia coli
Length: 44 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDAG_ECOLI.

Description E-value Query
Range
Subject
Range
gi|7466159 - gi|7466159|pir||F64885 hypothetical protein b1355 - Escherichia coli (strain K-12)
gi|1787618, gi|1... - gb|AAC74437.1| orf, hypothetical protein; Rac prophage [Escherichia coli K12], gi|16129316|ref|NP_4...
92.0 [0..1] [44..16]
gi|13361405, gi|... - gi|15831194|ref|NP_309967.1| hypothetical protein ECs1940 [Escherichia coli O157:H7], gi|13361405|db...
gi|25499410, gi|... - pir||F85747 unknown protein encoded within prophage CP-933R [imported] - Escherichia coli (strain O1...
gi|13361405, gi|... - gi|15831194|ref|NP_309967.1| hypothetical protein ECs1940 [Escherichia coli O157:H7 str. Sakai], gi|...
gi|12515394, gi|... - gi|15801810|ref|NP_287828.1| hypothetical protein Z2402 [Escherichia coli O157:H7 EDL933], gi|125153...
gi|209918600, gi... - gi|209918600|ref|YP_002292684.1| hypothetical protein ECSE_1409 [Escherichia coli SE11], gi|20991185...
92.0 [0..1] [44..16]

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Predicted Domain #1
Region A:
Residues: [1-44]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHYEVVQYL MDCCGITYNQ AVQALRSNDW DLWQAEVAIR SNKM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.540 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.452 a.5.2 UBA-like
View Download 0.441 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.441 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.437 a.5.2 UBA-like
View Download 0.416 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.380 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.379 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.375 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.308 a.5.1 DNA helicase RuvA subunit, C-terminal domain


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