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View Structure Prediction Details

Protein: YNFN_ECOLI
Organism: Escherichia coli
Length: 51 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNFN_ECOLI.

Description E-value Query
Range
Subject
Range
gi|218368345, gi... - gi|218561576|ref|YP_002394489.1| hypothetical protein ECS88_5023 [Escherichia coli S88], gi|21836834...
gi|117626708, gi... - gi|117626708|ref|YP_860031.1| hypothetical protein APECO1_2031 [Escherichia coli APEC O1], gi|115515...
98.0 [0..1] [51..39]
gi|16129510, gi|... - gb|AAC74624.1| orf, hypothetical protein; Qin prophage [Escherichia coli K12], gi|16129510|ref|NP_4...
gi|7466193 - gi|7466193|pir||B64910 hypothetical protein b1551 - Escherichia coli (strain K-12)
92.0 [0..1] [51..13]

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Predicted Domain #1
Region A:
Residues: [1-51]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREYPNGEKT HLTVMAAGFP SLTGDHKVIY VAADRHVTSE EILEAAIRLL S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.640 d.300.1 Description not found.
View Download 0.526 d.300.1 Description not found.
View Download 0.488 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.396 a.5.2 UBA-like
View Download 0.396 a.5.2 UBA-like
View Download 0.325 g.27.1 Fibronectin type I module
View Download 0.305 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.297 b.71.1 Glycosyl hydrolase domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle