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View Structure Prediction Details

Protein: SLU7
Organism: Homo sapiens
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLU7.

Description E-value Query
Range
Subject
Range
SLU7_MACFA - Pre-mRNA-splicing factor SLU7 OS=Macaca fascicularis GN=SLU7 PE=2 SV=1
857.0 [0..1] [586..1]
gi|109079607, gi... - gi|109079609|ref|XP_001084912.1| PREDICTED: similar to step II splicing factor SLU7 isoform 2 [Macac...
857.0 [0..1] [586..1]
SLU7 - SLU7 splicing factor homolog (S. cerevisiae)
857.0 [0..1] [586..1]
gi|73954102 - gi|73954102|ref|XP_536446.2| PREDICTED: similar to step II splicing factor SLU7 [Canis familiaris]
856.0 [0..1] [586..48]
gi|114603211, gi... - gi|114603217|ref|XP_001143136.1| PREDICTED: step II splicing factor SLU7 isoform 4 [Pan troglodytes]...
854.0 [0..1] [586..1]
SLU7_MOUSE - Pre-mRNA-splicing factor SLU7 OS=Mus musculus GN=Slu7 PE=1 SV=1
gi|151556678 - gi|151556678|gb|AAI48504.1| SLU7 splicing factor homolog (S. cerevisiae) [synthetic construct]
849.0 [0..1] [586..1]
SLU7_RAT - Pre-mRNA-splicing factor SLU7 OS=Rattus norvegicus GN=Slu7 PE=1 SV=2
839.0 [0..1] [586..1]
SLU7_BOVIN - Pre-mRNA-splicing factor SLU7 OS=Bos taurus GN=SLU7 PE=2 SV=2
827.0 [0..1] [586..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATVVDAVN AAPLSGSKEM SLEEPKKMTR EDWRKKKELE EQRKLGNAPA EVDEEGKDIN  60
   61 PHIPQYISSV PWYIDPSKRP TLKHQRPQPE KQKQFSSSGE WYKRGVKENS IITKYRKGAC 120
  121 ENCGAMTHKK KDCFERPRRV GAKFTGTNIA PDEHVQPQLM FDYDGKRDRW NGY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEEHMKIVE EYAKVDLAKR TLKAQKLQEE LASGKLVEQA NSPKHQWGEE EPNSQMEKDH  60
   61 NSEDEDEDKY ADDIDMPGQN FDSKRRITVR NLRIREDIAK YLRNLDPNSA YYDPKTRAMR 120
  121 ENPYANA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [301-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKNPDEVSYA GDNFVRYTGD TISMAQTQLF AWEAYDKGSE VHLQADPTKL ELLYKSFKVK  60
   61 KEDFKEQQKE SILEKYGGQE HLDAPPAELL LAQTEDYVEY SRHGTVIKGQ ERAVACSKYE 120
  121 EDVKIHNHTH IWGSYWKEGR WGYKCCHSFF KYSYCT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.525 N/A N/A a.39.1 EF-hand
View Download 0.446 N/A N/A a.4.1 Homeodomain-like
View Download 0.428 N/A N/A d.24.1 Pili subunits
View Download 0.393 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.385 N/A N/A a.22.1 Histone-fold
View Download 0.385 N/A N/A a.22.1 Histone-fold
View Download 0.351 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.343 N/A N/A d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
View Download 0.335 N/A N/A d.24.1 Pili subunits

Predicted Domain #4
Region A:
Residues: [457-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEAGKEIVNS EECIINEITG EESVKKPQTL MELHQEKLKE EKKKKKKKKK KHRKSSSDSD  60
   61 DEEKKHEKLK KALNAEEARL LHVKETMQID ERKRPYNSMY ETREPTEEEM EAYRMKRQRP 120
  121 DDPMASFLGQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.566 a.1.1 Globin-like
View Download 0.506 a.216.1 Description not found.
View Download 0.403 a.24.9 alpha-catenin/vinculin
View Download 0.401 a.8.4 Description not found.
View Download 0.347 a.24.11 Bacterial GAP domain
View Download 0.343 a.24.11 Bacterial GAP domain
View Download 0.343 a.1.1 Globin-like
View Download 0.308 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle