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View Structure Prediction Details

Protein: LIAS
Organism: Homo sapiens
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LIAS.

Description E-value Query
Range
Subject
Range
LIAS - lipoic acid synthetase
7.0E-95 [1..372] [1..372]
gi|114593623 - gi|114593623|ref|XP_526552.2| PREDICTED: lipoic acid synthetase isoform 3 [Pan troglodytes]
1.0E-94 [1..372] [1..372]
gi|109074017 - gi|109074017|ref|XP_001091994.1| PREDICTED: similar to lipoic acid synthetase isoform 1 precursor is...
5.0E-94 [1..372] [1..372]
gi|57048078 - gi|57048078|ref|XP_536255.1| PREDICTED: similar to lipoic acid synthetase isoform 1 precursor isofor...
2.0E-91 [1..371] [1..371]
LIAS_RAT - Lipoyl synthase, mitochondrial OS=Rattus norvegicus GN=Lias PE=2 SV=1
2.0E-91 [1..370] [1..369]
LIAS_MOUSE - Lipoyl synthase, mitochondrial OS=Mus musculus GN=Lias PE=1 SV=1
5.0E-91 [1..371] [1..370]
LIAS_BOVIN - Lipoyl synthase, mitochondrial OS=Bos taurus GN=LIAS PE=2 SV=1
1.0E-89 [1..372] [1..372]
LIAS_XENLA - Lipoyl synthase, mitochondrial OS=Xenopus laevis GN=lias PE=2 SV=1
2.0E-87 [12..372] [12..372]

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Predicted Domain #1
Region A:
Residues: [1-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRCGDAAR TLGPRVFGRY FCSPVRPLSS LPDKKKELLQ NGPDLQDFVS GDLADRSTWD  60
   61 EYKGNLKRQK GERLRLPPWL KTEIPMGKNY NKLKNTLRNL NLHTVCEEAR CPNIGECWGG 120
  121 GEYATATATI MLMGDTCTRG CRFCSVKTAR NPPPLDASEP YNTAKAIAEW GLDYVVLTSV 180
  181 DRDDMPDGGA EHIAKTVSYL KERNPKILVE CLTPDFRGDL KAIEKVALSG LDVYAHNVET 240
  241 VPELQSKVRD PRANFDQSLR VLKHAKKVQP DVISKTSIML GLGENDEQVY ATMKALREA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.30103
Match: 2a5hA
Description: 2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [300-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVDCLTLGQY MQPTRRHLKV EEYITPEKFK YWEKVGNELG FHYTASGPLV RSSYKAGEFF  60
   61 LKNLVAKRKT KDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.522879
Match: 1r30A
Description: The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle