| Protein: | gi|22035612 |
| Organism: | Homo sapiens |
| Length: | 938 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22035612.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..938] | [1..938] |
|
|
0.0 | [13..938] | [34..959] |
|
|
0.0 | [9..938] | [30..959] |
|
|
0.0 | [13..938] | [34..953] |
|
|
0.0 | [1..938] | [23..928] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MHQLSLIRGN RGRSIHILER TASSSTEPSV SRQLLEPEPV PLSKEADSWE IIEGLKIGQT 60
61 NVQKPDKHEG FMLKKRKWPL KGWHKRFFVL DNGMLKYSKA PLDIQKGKVH GSIDVGLSVM 120
121 SIKKKARRID LDTEEHIYHL KVKSQDWFDA WVSKLRHHRL YRQNEIVRS
|
| Detection Method: |  |
| Confidence: | 16.69897 |
| Match: | 2q13A |
| Description: | No description for 2q13A was found. |
|
Region A: Residues: [170-270] |
1 11 21 31 41 51
| | | | | |
1 PRDASFHIFP STSTAESSPA ANVSVMDGKM QPNSFPWQSP LPCSNSLPAT CTTGQSKVAA 60
61 WLQDSEEMDR CAEDLAHCQS NLVELSKLLQ NLEILQRTQS A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-415] |
1 11 21 31 41 51
| | | | | |
1 PNFTDMQANC VDISKKDKRV TRRWRTKSVS KDTKIQLQEG PPAKGQFSTT RRRQRLAAAV 60
61 ATTVPFSATM SPVRLHSSNP NLCADIEFQT PPSHLTDPLE SSTDYTKLQE EFCLIAQKVH 120
121 SLLKSAFNSI AIEKEKLKQM VSEQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [416-564] |
1 11 21 31 41 51
| | | | | |
1 HSKGHSTQMA RLRQSLSQAL NQNAELRSRL NRIHSESIIC DQVVSVNIIP SPDEAGEQIH 60
61 VSLPLSQQVA NESRLSMSES VSEFFDAQEV LLSASSSENE ASDDESYISD VSDNISEDNT 120
121 SVADNISRQI LNGELTGGAF RNGRRACLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-938] |
1 11 21 31 41 51
| | | | | |
1 APCPDTSNIN LWNILRNNIG KDLSKVSMPV ELNEPLNTLQ HLCEEMEYSE LLDKASETDD 60
61 PYERMVLVAA FAVSGYCSTY FRAGSKPFNP VLGETYECIR EDKGFRFFSE QVSHHPPISA 120
121 CHCESKNFVF WQDIRWKNKF WGKSMEILPV GTLNVMLPKY GDYYVWNKVT TCIHNILSGR 180
181 RWIEHYGEVT IRNTKSSVCI CKLTFVKVNY WNSNMNEVQG VVIDQEGKAV YRLFGKWHEG 240
241 LYCGVAPSAK CIWRPGSMPT NYELYYGFTR FAIELNELDP VLKDLLPPTD ARFRPDQRFL 300
301 EEGNLEAAAS EKQRVEELQR SRRRYMEENN LEHIPKFFKK VIDANQREAW VSNDTYWELR 360
361 KDPGFSKVDS PVLW
|
| Detection Method: | |
| Confidence: | 82.0 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| oxysterol binding | 2.56824234952236 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| 0.35288515581255 | bayes_pls_golite062009 | |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
