| Protein: | sdt-PE |
| Organism: | Drosophila melanogaster |
| Length: | 1367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sdt-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
773.0 | [0..552] | [1367..119] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MRILKQWNRR RSGSSIVVLD GDDLKPCLPD DYISGQHHLN HQQQLQLQQQ LQQQHPLQQQ 60
61 HYRTHSGDIR EIDQEMLTML SVN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-183] |
1 11 21 31 41 51
| | | | | |
1 QDNGPHREMA VDCPDTFIAR NKTPPRYPPP RPPQKHKKST NTTTTTTITA LTNNDHANKM 60
61 LIVAYHSSHQ HEQLQQQHPS KTSTTTTTIA LDVATQNLYN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-409] |
1 11 21 31 41 51
| | | | | |
1 QKQQNKLEQI ENYENCLQSE RNEQHEQQFE QQKQHQATTA MAATQVAQQQ TPSHKLQATL 60
61 SSDPNGNSNS NNNSHIVGIS SSSSSNNSSI TDDFLCVVDG LYQGRKDTAS PSSSAFDEVM 120
121 SKHTLDSFGS IAYRHLHQQH QATSNGNSSS NTSNTNSNTN SNTNSNSNTN GNTSNNTAVS 180
181 TKTATVTKTG VSSSNSNSNS LNSSNSSMHT SSSSSGHSSN IASATS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [410-699] |
1 11 21 31 41 51
| | | | | |
1 SSSATSSSTV PDDLSLAPPG YEVSQQQQQQ HLVATPVTML LPPMAKHREL PVDVPDSFIE 60
61 MVKTTPRYPP PAHLSSRGSL LSNGSASTAH TTLSSMGVAP SPVTATAAAA ASASAACATT 120
121 AVAAAAVSGV ADGDARRVAD ELNGNAKPVP PPRDHLRVEK DGRLVNCSPA PQLPDRRAPG 180
181 NASSGSSGAT THPLQHQQIA QIVEPTLEQL DSIKKYQEQL RRRREEEERI AQQNEFLRNS 240
241 LRGSRKLKAL QDTATPGKAV AQQQQQATLA TQVVGVENEA YLPDEDQPQA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [700-771] |
1 11 21 31 41 51
| | | | | |
1 EQIDGYGELI AALTRLQNQL SKSGLSTLAG RVSAAHSVLA SASVAHVLAA RTAVLQRRRS 60
61 RVSGPLHHSS LG
|
| Detection Method: | |
| Confidence: | 0.965 |
| Match: | 1vf6C |
| Description: | 2.1 Angstrom crystal structure of the PALS-1-L27N and PATJ L27 heterodimer complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.03622697799261 | bayes_pls_golite062009 |
| binding | 2.36911654864963 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.74246069832658 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.69175028046159 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.52039939090373 | bayes_pls_golite062009 |
| protein binding | 1.08813585723961 | bayes_pls_golite062009 |
| protein domain specific binding | 0.450006870427269 | bayes_pls_golite062009 |
| catalytic activity | 0.315768210630189 | bayes_pls_golite062009 |
|
Region A: Residues: [772-886] |
1 11 21 31 41 51
| | | | | |
1 LQKDIVELLT QSNTAAAIEL GNLLTSHEME GLLLAHDRIA NHTDGTPSPT PTPTPAIGAA 60
61 TGSTLSSPVA GPKRNLGMVV PPPVVPPPLA QRGAMPLPRG ESPPPVPMPP LATMP
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 1zl8B |
| Description: | NMR structure of L27 heterodimer from C. elegans Lin-7 and H. sapiens Lin-2 scaffold proteins |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [887-1003] |
1 11 21 31 41 51
| | | | | |
1 MSMPVNLPMS ACFGTLNDQN DNIRIIQIEK STEPLGATVR NEGEAVVIGR IVRGGAAEKS 60
61 GLLHEGDEIL EVNGQELRGK TVNEVCALLG AMQGTLTFLI VPAGSPPSVG VMGGTTG
|
| Detection Method: | |
| Confidence: | 20.30103 |
| Match: | 1va8A |
| Description: | Solution structure of the PDZ domain of Pals1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 3.03529700765506 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.83180079733297 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39826531242265 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.79696347300128 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.70730560221787 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.69528181005421 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.68920668586004 | bayes_pls_golite062009 |
| signal transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| molecular transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| transcription regulator activity | 0.387065538161985 | bayes_pls_golite062009 |
| receptor binding | 0.359972518335054 | bayes_pls_golite062009 |
| actin binding | 0.13059495339034 | bayes_pls_golite062009 |
|
Region A: Residues: [1004-1367] |
1 11 21 31 41 51
| | | | | |
1 SQLAGLGGAH RDTAVLHVRA HFDYDPEDDL YIPCRELGIS FQKGDVLHVI SREDPNWWQA 60
61 YREGEEDQTL AGLIPSQSFQ HQRETMKLAI AEEAGLARSR GKDGSGSKGA TLLCARKGRK 120
121 KKKKASSEAG YPLYATTAPD ETDPEEILTY EEVALYYPRA THKRPIVLIG PPNIGRHELR 180
181 QRLMADSERF SAAVPHTSRA RREGEVPGVD YHFITRQAFE ADILARRFVE HGEYEKAYYG 240
241 TSLEAIRTVV ASGKICVLNL HPQSLKLLRA SDLKPYVVLV APPSLDKLRQ KKLRNGEPFK 300
301 EEELKDIIAT ARDMEARWGH LFDMIIINND TERAYHQLLA EINSLEREPQ WVPAQWVHNN 360
361 RDES
|
| Detection Method: | |
| Confidence: | 93.0 |
| Match: | 1jxmA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
