| Protein: | sdt-PD, FBpp0300539 |
| Organism: | Drosophila melanogaster |
| Length: | 879 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sdt-PD, FBpp0300539.
| Description | E-value | Query Range |
Subject Range |
|
|
509.0 | [0..68] | [879..44] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MVVSTLHITL ENNGNVAAGQ PAAVAAASVV GAATSPTKFA VLSAQQLQLQ LQQQQQQQNE 60
61 KENHMNNNNN NSDYCDMNGN GVGMGNGGSG GPGSLTPQSP DQYVGSPV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-270] |
1 11 21 31 41 51
| | | | | |
1 SSAATPQRTA SALRRGIQIQ RSSTRLRQQQ EQLRRRREEE ERIAQQNEFL RNSLRGSRKL 60
61 KALQDTATPG KAVAQQQQQA TLATQVVGVE NEAYLPDEDQ PQAEQIDGYG ELIAALTRLQ 120
121 NQLSKSGLST LAGRVSAAHS VLASASVAHV LAARTAVLQR RR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-361] |
1 11 21 31 41 51
| | | | | |
1 SRVSGPLHHS SLGLQKDIVE LLTQSNTAAA IELGNLLTSH EMEGLLLAHD RIANHTDGTP 60
61 SPTPTPTPAI GAATGSTLSS PVAGPKRNLG M
|
| Detection Method: | |
| Confidence: | 1.28 |
| Match: | 1zl8B |
| Description: | NMR structure of L27 heterodimer from C. elegans Lin-7 and H. sapiens Lin-2 scaffold proteins |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [362-514] |
1 11 21 31 41 51
| | | | | |
1 VVPPPVVPPP LAQRGAMPLP RGESPPPVPM PPLATMPMSM PVNLPMSACF GTLNDQNDNI 60
61 RIIQIEKSTE PLGATVRNEG EAVVIGRIVR GGAAEKSGLL HEGDEILEVN GQELRGKTVN 120
121 EVCALLGAMQ GTLTFLIVPA GSPPSVGVMG GTT
|
| Detection Method: | |
| Confidence: | 15.045757 |
| Match: | 1va8A |
| Description: | Solution structure of the PDZ domain of Pals1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 3.03529700765506 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.83180079733297 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39826531242265 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.79696347300128 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.70730560221787 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.69528181005421 | bayes_pls_golite062009 |
| signal transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| molecular transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.00130123171287 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| transcription regulator activity | 0.387065538161985 | bayes_pls_golite062009 |
| receptor binding | 0.359972518335054 | bayes_pls_golite062009 |
|
Region A: Residues: [515-879] |
1 11 21 31 41 51
| | | | | |
1 GSQLAGLGGA HRDTAVLHVR AHFDYDPEDD LYIPCRELGI SFQKGDVLHV ISREDPNWWQ 60
61 AYREGEEDQT LAGLIPSQSF QHQRETMKLA IAEEAGLARS RGKDGSGSKG ATLLCARKGR 120
121 KKKKKASSEA GYPLYATTAP DETDPEEILT YEEVALYYPR ATHKRPIVLI GPPNIGRHEL 180
181 RQRLMADSER FSAAVPHTSR ARREGEVPGV DYHFITRQAF EADILARRFV EHGEYEKAYY 240
241 GTSLEAIRTV VASGKICVLN LHPQSLKLLR ASDLKPYVVL VAPPSLDKLR QKKLRNGEPF 300
301 KEEELKDIIA TARDMEARWG HLFDMIIINN DTERAYHQLL AEINSLEREP QWVPAQWVHN 360
361 NRDES
|
| Detection Method: | |
| Confidence: | 51.0 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
