| Protein: | CG15744-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15744-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
790.0 | [0..1127] | [1797..1] |
|
Region A: Residues: [1-634] |
1 11 21 31 41 51
| | | | | |
1 MPTATATSTA AEGGQAVQVQ THQDTELPQN PETGIATGQG TASSCPRKCS CRSTAENIHS 60
61 LKIRCDEQQI TNWRELDFGE DVTSIVSINA SKNSIALITA EDFRNFTELK RLDLSFNLLT 120
121 ELDKDTFGDS LAHLEKLKLA GNAISHIYEG TFDQMPKLKL LDLSGNPLAC DCGLIWLIAW 180
181 SSSREVRLQP PPKCESPGNF RGMPLKKLRV GKDFHCETLL QPLLELIPSQ NQVAFEGDEL 240
241 QLKCHAPRVA IGVPRESEDL PTKAYVFWGW SEKIRAKNST EDIIYQDPTK VFGDVNLETR 300
301 HSTDSGILQS ILRIASLTQN HTGMWDCTLR SQQANLSQAI VLHVVAKGTL YCEARVVHTN 360
361 KGTYHWPRTM RGETVLQECV EEPSDATQAR RASHECGPSG EWLNLDTESC VYVSETTRIL 420
421 EQFAKVNLTL TKGQNALEIA RRLHNFTQAQ TQLNRIRDPM DLEYIARTLV KYLDQLEQPQ 480
481 QQQEISHLLM DIVSQLLNLP AHLFRAAQSE QGTGQRLLHV VESSAMRLAL ASTQAEPLPA 540
541 EMIPWRGSLA QQRNLFVEFF NISLDAFVSL SCVWLEQSPR GFQCNSANDT IPMYEHGDID 600
601 AAIQLPYSVI GNSSTTLPAT TTIRSLRLMI SLHR
|
| Detection Method: |  |
| Confidence: | 24.09691 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [635-757] |
1 11 21 31 41 51
| | | | | |
1 NGKLLPNLRG SHNESLSSAI IGILAYSSDG EALQFRADNE LDPEEDVYQQ RVTVMLRAHP 60
61 YHNPLSAPQP AWWDADEQRW ETSVCQQHYQ HRTLVMFSCS RTGYYGLLQR SQYLNDFRSE 120
121 ESG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [758-1192] |
1 11 21 31 41 51
| | | | | |
1 ARFRHPPAAV YAGCGLLFAC CAFNAVTFAV FGRAVRINRV QRHALVNTWL ALGALALAFS 60
61 LGIYQTASQP QCRLLGLLMH YLGLCVLLWV CVSLSSMYKR LTKTTTSGQG QCPGQDMEPQ 120
121 RERERKPILG IYLVGWGIAL LICGISSAVN LAEYATYDYC FLHSSTTLNA LLVPAVILVI 180
181 FCGILALCIY YQLSQQAVNV LQLQMQHQQN RQYSDNNTQA TEHIDLDWLD ANGSATTAAI 240
241 GGGSGNHGGR KEQDHMQEQY STLSNPLSSI VDDFERSNLS HLRGHFIFLV LYAGAWLSAA 300
301 AYVNGGQELY VLSFAGCCSV LGIFLLIFYN LSRNDARQAW SQGRDGRSIP AKLVTYNNGS 360
361 QARGAHPSSM MPGPGTAMIS NSIVAYKANP GPGSLYEANN SAGSRSNSQC SRSMRSQTRS 420
421 QTRSQQEQLL QANGA
|
| Detection Method: | |
| Confidence: | 0.955 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1193-1331] |
1 11 21 31 41 51
| | | | | |
1 GGVTIINNTS GQPGAGGGPA AGGVSGSTGG APVPPHSLNA LLHGSSHDLI PSAEIFYNPN 60
61 QINVARKFFK KQKRLAKRNN FELQRQTMPQ MQLQMQMQMQ LHSQHSLSDA SSEQLYSRHH 120
121 NAMTMLAGGS KINNTNLHY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1332-1797] |
1 11 21 31 41 51
| | | | | |
1 KNQGSPMAGA PKEHGNMGAM SSGGDSMQFK RFVPASASSA SKIMQANIYT NIPETLTPQH 60
61 EVIKLRANGR TRTPSLLDET LHELDDDEED EEEEEHGQTP ATMEEPEHEL EEEDASSLDE 120
121 HAPLYANTLP PASGMSSLFR NRGSSHQPMS STPVKQPSLE AMNSLGLPEV SLEEPLLQKH 180
181 EIYVSNSLQV TTSNSIQLDD DFPSVLIRFS QQQQSKSLNN ISEMLAGGGG GGGNAPGLDS 240
241 LGDQQESSQL SVNEGSTLEE QQLRQIYSCS SSNLSQLKGH HPTATVDTED DGRLLSGSPT 300
301 NESDLNYQNS EISIRSHGLY APQADNDLNL TLTDDFRCYQ SSNASDADVD VLNEFDDEFV 360
361 AATGGERVVG DAEQDPHHDH DQDTSIDELY EAIKCRSPLR NKQEAVERFE RERERDREKE 420
421 MEMEAKPLSN SHNENLNETI EDDSSQSSVI SYIDPRAANE PRPFPS
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 2oevA |
| Description: | No description for 2oevA was found. |
