YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0310553, CG4...
Organism: Drosophila melanogaster
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310553, CG4....

Description E-value Query
Range
Subject
Range
gi|21430034 - gi|21430034|gb|AAM50695.1| GM02889p [Drosophila melanogaster]
400.0 [0..1] [365..1]

Back

Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFNWLSEYV ASISSSIAST SPWRQLQQQV QQLVPNPQAI YCRIRSSSAE ALEHVLIACA  60
   61 VYLLVCLGLY KLTFWLSGAG SGSGLDAHHN GNDTSNAGSG EGAELNPSSD GNRSPGGLKQ 120
  121 ALQSGIRLRS VRLPKTAC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERVLLITAH PDDECMFFGP LIYSLTQRQG CQVYILCLSN GNFEHKAKVR RQELWRSCSK  60
   61 LGIPESNIVL MNATNLPDDP YVDWRPDAVA SLILHTIESL DIQAIFTFDR DGVSSHPNHC 120
  121 AVYYAAASLC LANLLPKDCK FYTLDSINVV RKYLSILDLL CTCFMSTHWC ILNWKEAAIV 180
  181 RSAMMEHQSQ MRWFRWLYIY FSRYMFINSM RQINLSDVEL EMQIHDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2ixdA
Description: No description for 2ixdA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle